Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02701 and RBAM_016450

See DNA alignment / Visit BSNT_02701 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:37
# Commandline: needle
#    -asequence pep-align/BSNT_02701___ylxR.1.9828.seq
#    -bsequence pep-align/RBAM_016450___ylxR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02701___ylxR-RBAM_016450___ylxR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02701___ylxR-RBAM_016450___ylxR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02701___ylxR
# 2: RBAM_016450___ylxR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 91
# Identity:      86/91 (94.5%)
# Similarity:    90/91 (98.9%)
# Gaps:           0/91 ( 0.0%)
# Score: 443.0
# 
#
#=======================================

BSNT_02701___      1 MNKHKKIPLRKCVVTGEMKPKKELIRVVRSKEGEISVDPTGKKNGRGAYL     50
                     |||.||||||||||||||||||||||:||||||||||||||||||||||:
RBAM_016450__      1 MNKRKKIPLRKCVVTGEMKPKKELIRIVRSKEGEISVDPTGKKNGRGAYI     50

BSNT_02701___     51 TLDKECILAAKKKNTLQNQFQSQIDDQIFDELLELAEKVKK     91
                     ||:||||||||||||||||||||||||||:|||||||||||
RBAM_016450__     51 TLEKECILAAKKKNTLQNQFQSQIDDQIFEELLELAEKVKK     91


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