Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02701 and RBAM_016450

See Amino acid alignment / Visit BSNT_02701 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:37
# Commandline: needle
#    -asequence dna-align/BSNT_02701___ylxR.1.9828.seq
#    -bsequence dna-align/RBAM_016450___ylxR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02701___ylxR-RBAM_016450___ylxR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02701___ylxR-RBAM_016450___ylxR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02701___ylxR
# 2: RBAM_016450___ylxR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     241/276 (87.3%)
# Similarity:   241/276 (87.3%)
# Gaps:           0/276 ( 0.0%)
# Score: 1065.0
# 
#
#=======================================

BSNT_02701___      1 GTGAATAAACACAAAAAGATCCCATTACGCAAATGTGTAGTGACTGGTGA     50
                     ||||||||.|..|||||.||.||..|.||||||||.||.||.||.||.||
RBAM_016450__      1 GTGAATAAGCGAAAAAAAATTCCTCTGCGCAAATGCGTGGTAACGGGGGA     50

BSNT_02701___     51 AATGAAGCCTAAAAAGGAACTGATCCGAGTTGTACGGTCGAAAGAAGGCG    100
                     ||||||||||||||||||||||||||||.||||.||.||.||||||||.|
RBAM_016450__     51 AATGAAGCCTAAAAAGGAACTGATCCGAATTGTCCGTTCTAAAGAAGGAG    100

BSNT_02701___    101 AAATCTCAGTAGACCCGACCGGAAAAAAGAATGGGCGGGGTGCTTATTTA    150
                     |.||.|||||.||.|||||||||||.|||||.|||||||||||.|||.|.
RBAM_016450__    101 AGATTTCAGTCGATCCGACCGGAAAGAAGAACGGGCGGGGTGCCTATATC    150

BSNT_02701___    151 ACGCTGGATAAAGAGTGCATCTTAGCAGCAAAAAAGAAAAACACTTTGCA    200
                     ||.||.||.|||||.|||||||||||.||.||||||||||||||.|||||
RBAM_016450__    151 ACCCTTGAGAAAGAATGCATCTTAGCTGCGAAAAAGAAAAACACATTGCA    200

BSNT_02701___    201 AAATCAATTTCAATCACAAATCGATGACCAGATTTTCGATGAATTGCTGG    250
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
RBAM_016450__    201 AAATCAATTTCAATCACAAATCGATGACCAGATTTTCGAAGAATTGCTGG    250

BSNT_02701___    251 AACTGGCGGAAAAGGTGAAAAAATAA    276
                     ||||||||||||||||||||||||||
RBAM_016450__    251 AACTGGCGGAAAAGGTGAAAAAATAA    276


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