Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02696 and RBAM_016410

See DNA alignment / Visit BSNT_02696 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:36
# Commandline: needle
#    -asequence pep-align/BSNT_02696___proS.1.9828.seq
#    -bsequence pep-align/RBAM_016410___proS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02696___proS-RBAM_016410___proS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02696___proS-RBAM_016410___proS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02696___proS
# 2: RBAM_016410___proS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 564
# Identity:     491/564 (87.1%)
# Similarity:   526/564 (93.3%)
# Gaps:           0/564 ( 0.0%)
# Score: 2550.0
# 
#
#=======================================

BSNT_02696___      1 MRQSLTLIPTLREVPADAEAKSHQLLLRAGFIRQNTSGVYSYMPLAYKVI     50
                     |||||||||||||||||||||||:|||||||||||||||||||||||:||
RBAM_016410__      1 MRQSLTLIPTLREVPADAEAKSHKLLLRAGFIRQNTSGVYSYMPLAYRVI     50

BSNT_02696___     51 QNIQQIVREEMEKIDAVEMLMPALQQAETWQESGRWYTYGPELMRLKDRH    100
                     ||||:|||||||||:|||||||||||||||||||||||||||||||||||
RBAM_016410__     51 QNIQKIVREEMEKINAVEMLMPALQQAETWQESGRWYTYGPELMRLKDRH    100

BSNT_02696___    101 GREFALGATHEEVITSLVRDEVKSYKRLPLTLYQIQSKFRDEKRPRFGLL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016410__    101 GREFALGATHEEVITSLVRDEVKSYKRLPLTLYQIQSKFRDEKRPRFGLL    150

BSNT_02696___    151 RGREFIMKDAYSFHASAESLDETYQKMYEAYSNIFARCGINVRPVIADSG    200
                     ||||||||||||||||.|||:||||.||.|||:|||||.:||||||||||
RBAM_016410__    151 RGREFIMKDAYSFHASEESLEETYQNMYGAYSSIFARCELNVRPVIADSG    200

BSNT_02696___    201 AMGGKDTHEFMALSAIGEDTIAYSDESQYAANIEMAEVLHQEVPSDEEPK    250
                     ||||||||||||||.||||||||||.|.||||.|||||:....||||.|:
RBAM_016410__    201 AMGGKDTHEFMALSEIGEDTIAYSDGSSYAANTEMAEVVMNSEPSDETPE    250

BSNT_02696___    251 ALEKVHTPNVKTIEELTAFLQVSAEACIKSVLFKADDRFVLVLVRGDHEV    300
                     ||||:.|||||:||||.:|||:...|||||:|||||||||||||||||||
RBAM_016410__    251 ALEKIDTPNVKSIEELASFLQIEPSACIKSMLFKADDRFVLVLVRGDHEV    300

BSNT_02696___    301 NDIKVKNLLHAEVVELATHEEVIQQLGTEPGFVGPVGIHQDVEVYADQAV    350
                     ||:||||||:|||||||:||||.::|||||||.||:|...|:|:||||||
RBAM_016410__    301 NDVKVKNLLNAEVVELASHEEVAEKLGTEPGFAGPIGAAGDIEIYADQAV    350

BSNT_02696___    351 KAMVNAVAGANEGDHHYKNVNVNRDAQIKEFADLRFIKEGDPSPDGKGTI    400
                     |.|||||:||||.|.||:|||:.|||.:|.:||||.|:||||||||||||
RBAM_016410__    351 KVMVNAVSGANEKDRHYRNVNIERDASVKAYADLRIIQEGDPSPDGKGTI    400

BSNT_02696___    401 RFAEGIEVGQVFKLGTRYSEAMNATYLDENGRAQPMLMGCYGIGVSRTLS    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016410__    401 RFAEGIEVGQVFKLGTRYSEAMNATYLDENGRAQPMLMGCYGIGVSRTLS    450

BSNT_02696___    451 AIAEQHHDEKGLIWPKSVAPYDLHILALNMKNDGQRELAEKLYADLKAEG    500
                     ||||||||||||||||||||||||||||||||:.|:||||:||...:|||
RBAM_016410__    451 AIAEQHHDEKGLIWPKSVAPYDLHILALNMKNEAQKELAEQLYGKFQAEG    500

BSNT_02696___    501 YEVLYDDRAERAGVKFADSDLIGLPIRITVGKRADEGIVEVKIRQTGEST    550
                     ||||||||||||||||||||||||||||||||||||||||||||:||||.
RBAM_016410__    501 YEVLYDDRAERAGVKFADSDLIGLPIRITVGKRADEGIVEVKIRKTGESA    550

BSNT_02696___    551 EISVDELSAFISKQ    564
                     |:||||||.||..:
RBAM_016410__    551 EVSVDELSEFIKTK    564


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02696 and RBAM_016410

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
