Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02691 and RBAM_016380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:35
# Commandline: needle
# -asequence pep-align/BSNT_02691___cdsA.1.9828.seq
# -bsequence pep-align/RBAM_016380___cdsA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02691___cdsA-RBAM_016380___cdsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02691___cdsA-RBAM_016380___cdsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02691___cdsA
# 2: RBAM_016380___cdsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 266
# Identity: 211/266 (79.3%)
# Similarity: 235/266 (88.3%)
# Gaps: 4/266 ( 1.5%)
# Score: 1111.5
#
#
#=======================================
BSNT_02691___ 1 MKQRILTGVLAAIVFLFLVIVGKLPFTILIYAMGSVALFELLRMKKLKLV 50
||||:|||||||.:||||||.|.||||:.:|.|||:|||||||||||:..
RBAM_016380__ 1 MKQRLLTGVLAAALFLFLVIFGGLPFTVFVYVMGSIALFELLRMKKLRFF 50
BSNT_02691___ 51 SLPGLIGLLLLWMFLLPSQYSFFEADGISKMEIALFAVLLLLTYTVLVKN 100
|.||||.|||||::::|.:|.||:| |||:.:||||:||:|||||||
RBAM_016380__ 51 SFPGLISLLLLWLYMMPDKYHFFDA----KMEVTIFAVLILLSYTVLVKN 96
BSNT_02691___ 101 TFTFDEVGFITLAAIYIGMCFHYFIEIRNLDQYGLTYIFYACVVIWSTDS 150
||||||||||.||.:|||:||||||||||::..||.||||||||||||||
RBAM_016380__ 97 TFTFDEVGFIVLATVYIGLCFHYFIEIRNIETNGLLYIFYACVVIWSTDS 146
BSNT_02691___ 151 GAYFVGKSLGKRKLWPEISPNKTVEGFAGGIVIALVLATIFQLVAQLPIP 200
|||||||||||||||||||||||||||.|||||||:...:|||.|.|||.
RBAM_016380__ 147 GAYFVGKSLGKRKLWPEISPNKTVEGFLGGIVIALIFTAVFQLFAHLPIS 196
BSNT_02691___ 201 YIYLLLITLFLSVFGQLGDLVESALKRHYDVKDSGKILPGHGGILDRFDS 250
|..||:|||.||||||:|||||||||||||||||||||||||||||||||
RBAM_016380__ 197 YPVLLVITLVLSVFGQIGDLVESALKRHYDVKDSGKILPGHGGILDRFDS 246
BSNT_02691___ 251 FLFVMPFLYFLLALFS 266
||||||||||||||||
RBAM_016380__ 247 FLFVMPFLYFLLALFS 262
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