Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02690 and RBAM_016370

See DNA alignment / Visit BSNT_02690 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:35
# Commandline: needle
#    -asequence pep-align/BSNT_02690___uppS.1.9828.seq
#    -bsequence pep-align/RBAM_016370___uppS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02690___uppS-RBAM_016370___uppS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02690___uppS-RBAM_016370___uppS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02690___uppS
# 2: RBAM_016370___uppS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     238/260 (91.5%)
# Similarity:   253/260 (97.3%)
# Gaps:           0/260 ( 0.0%)
# Score: 1248.0
# 
#
#=======================================

BSNT_02690___      1 MLNILKNWKNQQTAASNLERYTKEDILKGEIPEHIAIIMDGNGRWAKKRS     50
                     ||||||||||||.|||||||||||||||||||.|||||||||||||||||
RBAM_016370__      1 MLNILKNWKNQQNAASNLERYTKEDILKGEIPAHIAIIMDGNGRWAKKRS     50

BSNT_02690___     51 LPRIAGHHEGMKVVKRTTKLANELGVKVLTLYAFSTENWKRPKMEVDFLM    100
                     ||||||||||||||||.||||::|||||||||||||||||||||||||||
RBAM_016370__     51 LPRIAGHHEGMKVVKRVTKLASQLGVKVLTLYAFSTENWKRPKMEVDFLM    100

BSNT_02690___    101 KLPEEFLNTYLPELVEENVQVRIIGDETALPAHTLRAIEKAVQDTAQNDG    150
                     ||||||||||||||:||||||:|||||:|||:||.|||||||:||.||||
RBAM_016370__    101 KLPEEFLNTYLPELIEENVQVKIIGDESALPSHTYRAIEKAVKDTEQNDG    150

BSNT_02690___    151 MILNFALNYGGRTEIVSAAKSLAEKVKEGSLNIEDIDESLFSTYLMTESL    200
                     :|||||||||||||||:|||:|||:||.|:||||||||:|||.:||||||
RBAM_016370__    151 LILNFALNYGGRTEIVNAAKALAEQVKSGTLNIEDIDEALFSGHLMTESL    200

BSNT_02690___    201 QDPELLIRTSGEIRLSNFMLWQVAYSEFVFTDVLWPDFKEDHFLQALGEF    250
                     ||||||||||||||||||||||||||||||||||||||||||||||:|||
RBAM_016370__    201 QDPELLIRTSGEIRLSNFMLWQVAYSEFVFTDVLWPDFKEDHFLQAVGEF    250

BSNT_02690___    251 QQRGRRFGGI    260
                     ||||||||||
RBAM_016370__    251 QQRGRRFGGI    260


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