Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02688 and RBAM_016350

See DNA alignment / Visit BSNT_02688 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:35
# Commandline: needle
#    -asequence pep-align/BSNT_02688___pyrH.1.9828.seq
#    -bsequence pep-align/RBAM_016350___pyrH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02688___pyrH-RBAM_016350___pyrH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02688___pyrH-RBAM_016350___pyrH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02688___pyrH
# 2: RBAM_016350___pyrH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity:     237/240 (98.8%)
# Similarity:   238/240 (99.2%)
# Gaps:           0/240 ( 0.0%)
# Score: 1174.0
# 
#
#=======================================

BSNT_02688___      1 MEKPKYKRIVLKLSGEALAGEQGNGINPTVIQSIAKQVKEIAELEVEVAV     50
                     ||||||.|||||||||||||||||||||||||||||||||||||:|||||
RBAM_016350__      1 MEKPKYNRIVLKLSGEALAGEQGNGINPTVIQSIAKQVKEIAELDVEVAV     50

BSNT_02688___     51 VVGGGNLWRGKTGSDLGMDRATADYMGMLATVMNSLALQDSLETLGIQSR    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016350__     51 VVGGGNLWRGKTGSDLGMDRATADYMGMLATVMNSLALQDSLETLGIQSR    100

BSNT_02688___    101 VQTSIEMRQVAEPYIRRKAIRHLEKKRVVIFAAGTGNPYFSTDTTAALRA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016350__    101 VQTSIEMRQVAEPYIRRKAIRHLEKKRVVIFAAGTGNPYFSTDTTAALRA    150

BSNT_02688___    151 AEIEADVILMAKNNVDGVYNADPRKDESAVKYESLSYLDVLKDGLEVMDS    200
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
RBAM_016350__    151 AEIEADVILMAKNNVDGVYNADPRKDESAVKYEKLSYLDVLKDGLEVMDS    200

BSNT_02688___    201 TASSLCMDNDIPLIVFSIMEEGNIKRAVIGESIGTIVRGK    240
                     ||||||||||||||||||||||||||||||||||||||||
RBAM_016350__    201 TASSLCMDNDIPLIVFSIMEEGNIKRAVIGESIGTIVRGK    240


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