Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02688 and RBAM_016350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:35
# Commandline: needle
# -asequence dna-align/BSNT_02688___pyrH.1.9828.seq
# -bsequence dna-align/RBAM_016350___pyrH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02688___pyrH-RBAM_016350___pyrH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02688___pyrH-RBAM_016350___pyrH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02688___pyrH
# 2: RBAM_016350___pyrH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 723
# Identity: 619/723 (85.6%)
# Similarity: 619/723 (85.6%)
# Gaps: 0/723 ( 0.0%)
# Score: 2679.0
#
#
#=======================================
BSNT_02688___ 1 ATGGAAAAACCAAAATACAAACGTATCGTATTAAAGCTTAGCGGGGAAGC 50
||||||||||||||||||||.||||||||.||||||||||||||.|||||
RBAM_016350__ 1 ATGGAAAAACCAAAATACAATCGTATCGTTTTAAAGCTTAGCGGAGAAGC 50
BSNT_02688___ 51 ATTGGCAGGAGAACAGGGAAATGGAATTAACCCGACTGTCATTCAATCCA 100
||||||||||||.||||||||.||.|||||.|||||||||||.|||||||
RBAM_016350__ 51 ATTGGCAGGAGAGCAGGGAAACGGCATTAATCCGACTGTCATCCAATCCA 100
BSNT_02688___ 101 TTGCAAAGCAAGTGAAGGAAATCGCTGAGCTTGAAGTCGAAGTGGCTGTT 150
|.||.||.|||||.||.|||||||||||||||||.|||||||||||.||.
RBAM_016350__ 101 TCGCTAAACAAGTAAAAGAAATCGCTGAGCTTGACGTCGAAGTGGCCGTA 150
BSNT_02688___ 151 GTAGTAGGCGGCGGCAACTTATGGCGCGGAAAAACAGGAAGTGACCTGGG 200
||.||||||||||||||||||||||||||||||||.||.||||||.|.||
RBAM_016350__ 151 GTCGTAGGCGGCGGCAACTTATGGCGCGGAAAAACGGGCAGTGACTTAGG 200
BSNT_02688___ 201 CATGGACCGCGCGACTGCTGACTATATGGGAATGCTGGCGACAGTAATGA 250
.||||||||.||||||||.||.||||||||.|||||.||.||.||.||||
RBAM_016350__ 201 AATGGACCGTGCGACTGCCGATTATATGGGCATGCTTGCTACTGTCATGA 250
BSNT_02688___ 251 ATTCGCTTGCTCTTCAAGACAGCTTGGAAACACTCGGAATCCAGTCCAGA 300
|.||.|||||.||.||.||||||.|||||||.||||||||.|||||||||
RBAM_016350__ 251 ACTCACTTGCCCTGCAGGACAGCCTGGAAACGCTCGGAATTCAGTCCAGA 300
BSNT_02688___ 301 GTGCAAACATCCATTGAAATGAGACAAGTTGCTGAACCGTACATAAGAAG 350
|||||.|||||.|||||||||.|.||.||.|||||.||.|||||.|||||
RBAM_016350__ 301 GTGCAGACATCAATTGAAATGCGTCAGGTCGCTGAGCCTTACATCAGAAG 350
BSNT_02688___ 351 AAAAGCGATACGCCACTTAGAGAAAAAACGTGTCGTTATTTTCGCTGCGG 400
||||||.||.||||||.|.|||||||||||.||.||||||||.||.||||
RBAM_016350__ 351 AAAAGCCATCCGCCACCTGGAGAAAAAACGCGTTGTTATTTTTGCCGCGG 400
BSNT_02688___ 401 GCACAGGAAACCCATATTTCTCAACTGATACGACAGCTGCACTGCGGGCT 450
|.|||||||||||.||||||||.||.||.||.||.||.||.|||||.||.
RBAM_016350__ 401 GAACAGGAAACCCTTATTTCTCTACGGACACAACCGCAGCGCTGCGTGCC 450
BSNT_02688___ 451 GCTGAAATTGAGGCAGACGTTATTTTGATGGCTAAAAATAACGTTGACGG 500
||||||||.||.||.|||||.||.||.|||||.||||||||.||.|||||
RBAM_016350__ 451 GCTGAAATCGAAGCGGACGTGATCTTAATGGCGAAAAATAATGTCGACGG 500
BSNT_02688___ 501 TGTGTATAATGCTGATCCTAGAAAAGATGAATCAGCTGTTAAGTATGAAT 550
||||||||||||||||||.|||||||||||.|||||.|||||.||.|||.
RBAM_016350__ 501 TGTGTATAATGCTGATCCGAGAAAAGATGAGTCAGCCGTTAAATACGAAA 550
BSNT_02688___ 551 CACTTTCTTATCTTGACGTTCTTAAAGACGGCCTGGAAGTCATGGATTCA 600
.|.|.||||||||.||.||..|.||||||||.|||||||||||||||||.
RBAM_016350__ 551 AATTATCTTATCTCGATGTGTTAAAAGACGGGCTGGAAGTCATGGATTCT 600
BSNT_02688___ 601 ACAGCTTCCTCTTTATGCATGGACAATGACATTCCGCTTATCGTCTTTTC 650
||.|||||.||..||||.|||||.|||||.||||||||.|||||||||||
RBAM_016350__ 601 ACGGCTTCTTCACTATGTATGGATAATGATATTCCGCTGATCGTCTTTTC 650
BSNT_02688___ 651 TATTATGGAAGAAGGAAATATCAAACGTGCCGTTATCGGTGAATCAATCG 700
|||||||||||||||||||||.||.||||||||.|||||.||||||||||
RBAM_016350__ 651 TATTATGGAAGAAGGAAATATTAAGCGTGCCGTAATCGGCGAATCAATCG 700
BSNT_02688___ 701 GAACGATCGTGAGGGGGAAATAA 723
||||||||||.||||||||||||
RBAM_016350__ 701 GAACGATCGTAAGGGGGAAATAA 723
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