Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02684 and RBAM_016320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:35
# Commandline: needle
# -asequence pep-align/BSNT_02684___ylxL.1.9828.seq
# -bsequence pep-align/RBAM_016320___swrB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02684___ylxL-RBAM_016320___swrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02684___ylxL-RBAM_016320___swrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02684___ylxL
# 2: RBAM_016320___swrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 170
# Identity: 98/170 (57.6%)
# Similarity: 126/170 (74.1%)
# Gaps: 15/170 ( 8.8%)
# Score: 472.0
#
#
#=======================================
BSNT_02684___ 1 MKNMSTLLWLLSFTLHGVLLYAVIILYTRLAAVKETEKQQKQILEETENT 50
||||||||||.|||||||||||||||.:|:||||:|||:||||||||
RBAM_016320__ 1 ---MSTLLWLLSFVLHGVLLYAVIILYTRFSALKETERQQKKILEETENT 47
BSNT_02684___ 51 LAAFLLELKEENEKLIENKASSASQSDEESQKSGLQTSETYQERDPVQEA 100
|||||||||||||:|.:.|:..|..:::....: :|.:|.
RBAM_016320__ 48 LAAFLLELKEENERLEDAKSRQAPDAEDAEPLA-----------EPKEEP 86
BSNT_02684___ 101 ENLPEHIEGLITEVDRREELVNSEVQSFEDQVIELYEQGYSASQIAQKMK 150
: :|:|:|.||:..:|.|...|:...|||::|.||||||.:.::||::|:
RBAM_016320__ 87 D-IPDHMEKLISATERAESDENNGAHSFEERVSELYEQGLTPAEIAKRMQ 135
BSNT_02684___ 151 SGKTEIELFLKFRSKGVKDS 170
|||||||||||||.|.||||
RBAM_016320__ 136 SGKTEIELFLKFRGKAVKDS 155
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