Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02676 and RBAM_016260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:34
# Commandline: needle
# -asequence pep-align/BSNT_02676___cheB.1.9828.seq
# -bsequence pep-align/RBAM_016260___cheB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02676___cheB-RBAM_016260___cheB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02676___cheB-RBAM_016260___cheB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02676___cheB
# 2: RBAM_016260___cheB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 275/363 (75.8%)
# Similarity: 307/363 (84.6%)
# Gaps: 14/363 ( 3.9%)
# Score: 1372.0
#
#
#=======================================
BSNT_02676___ 1 MIRVLVVDDSAFMRKMISDFLTEEKQIEVIGTARNGEEALKKIELLKPDV 50
|||||||||||||||||:|||..|.|||||||||||||||||||||||||
RBAM_016260__ 1 MIRVLVVDDSAFMRKMITDFLAAEVQIEVIGTARNGEEALKKIELLKPDV 50
BSNT_02676___ 51 ITLDVEMPVMNGTDTLRKIIEIYNLPVIMVSSQTEKGKECTINCLEIGAF 100
:|||:|||||||||||||||.||.||||||||||::||:.||||||:|||
RBAM_016260__ 51 VTLDIEMPVMNGTDTLRKIISIYKLPVIMVSSQTQQGKDRTINCLEMGAF 100
BSNT_02676___ 101 DFITKPSGSISLDLYKIKEQLVERVVAAGLSGKRKRPVSQTVRPEPIVRA 150
||||||||:||||||||||||:|||:|||||..:| ||..|:.
RBAM_016260__ 101 DFITKPSGAISLDLYKIKEQLIERVIAAGLSRAQK--------PEAAVKE 142
BSNT_02676___ 151 VVKPE------LSKPKPGTGRQIVCIGTSTGGPRALQKVIPKLPKDLNAP 194
...|| ..:||..:.:|.|.|.||||||||||||||||||||.||
RBAM_016260__ 143 SSIPERPALAGFERPKAKSAKQAVFIATSTGGPRALQKVIPKLPKDLKAP 192
BSNT_02676___ 195 VVVVQHMPEGFTASLADRLNHLSDIQVKEAKDGEAALNGCVYIAPGGKNI 244
|.||||||||||||||||||||||||||||::||.|.:|.|||||||||:
RBAM_016260__ 193 VFVVQHMPEGFTASLADRLNHLSDIQVKEAENGEEAKDGWVYIAPGGKNM 242
BSNT_02676___ 245 SVIKNSEGLQVVLDNHDTPSRHKPSADYLFRSVGKLTDYEKVAVIMTGMG 294
:|.:....|:::||.|||.|||||||||||||..:|:|||||||||||||
RBAM_016260__ 243 TVAEEGGRLRIILDVHDTESRHKPSADYLFRSASRLSDYEKVAVIMTGMG 292
BSNT_02676___ 295 SDGTAGLKDMLTAGNVKAIAESEESCVVYGMPKAAVKAGLIHEIKHVEDI 344
||||.|:|:||..|.||.||||:|||||:||||:|:||||||||||||||
RBAM_016260__ 293 SDGTEGVKEMLRTGGVKTIAESDESCVVFGMPKSAIKAGLIHEIKHVEDI 342
BSNT_02676___ 345 AASITSCVKKERV 357
|||||.|||||||
RBAM_016260__ 343 AASITGCVKKERV 355
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