Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02675 and RBAM_016250

See DNA alignment / Visit BSNT_02675 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:34
# Commandline: needle
#    -asequence pep-align/BSNT_02675___ylxH.1.9828.seq
#    -bsequence pep-align/RBAM_016250___ylxH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02675___ylxH-RBAM_016250___ylxH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02675___ylxH-RBAM_016250___ylxH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02675___ylxH
# 2: RBAM_016250___ylxH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     198/298 (66.4%)
# Similarity:   242/298 (81.2%)
# Gaps:           3/298 ( 1.0%)
# Score: 1017.0
# 
#
#=======================================

BSNT_02675___      1 MNRYDQAATLRAKMEKRERVLPMVYSQKAKTLAVISGKGGVGKSNITLNM     50
                      .:.|||.:||.||.:|:.:.|.:|.:||||||||||||||||||:||||
RBAM_016250__      1 -MKPDQAESLRRKMRERQMIKPELYEKKAKTLAVISGKGGVGKSNLTLNM     49

BSNT_02675___     51 ALALQDKGKKVLLIDLDIGMGNIDILIGNSSSATIIDVLTDRKPLLQSLS    100
                     |:|||:||||.|:|||||||||||:|||.:||.|||||:.:|..|.||||
RBAM_016250__     50 AVALQEKGKKALIIDLDIGMGNIDVLIGAASSRTIIDVMENRHALAQSLS     99

BSNT_02675___    101 IGPKGLRYISGGTGLDVMFQLDQRKWTFFANELSHALSQFDYVLFDMGAG    150
                     .||||||||||||||:.::|.|:.||:.|.|.||..||.|||||||||||
RBAM_016250__    100 SGPKGLRYISGGTGLEAIYQADREKWSAFMNGLSAVLSDFDYVLFDMGAG    149

BSNT_02675___    151 LSKDQLPFILSAEDILIITTPEPTAILDAYSAVKHLVLTENKLSMKVAVN    200
                     |||:||||||||||||.:||||||||:|||||:|||:|.:.:|::.:|||
RBAM_016250__    150 LSKEQLPFILSAEDILAVTTPEPTAIMDAYSAIKHLLLADERLTVNIAVN    199

BSNT_02675___    201 RCRDQKEGLDAFARLSRTIHMFLDVQVQFAGSVSDDVIVSKAVVEQVPFF    250
                     |.|.||:.||.:.|||..||.||...|:||||:.||.:||:||::||||.
RBAM_016250__    200 RARAQKQALDTYNRLSHAIHTFLGAGVRFAGSIPDDPLVSQAVIDQVPFL    249

BSNT_02675___    251 IKSPQAKASRSVRILADALFGREETRHKEDKQTFIEKLSSFLMRRA--    296
                     |||||||||||||:|.|.||..||.:.:|:|..|||:|||||:||.  
RBAM_016250__    250 IKSPQAKASRSVRLLTDVLFQTEENKPREEKPAFIERLSSFLLRRTLQ    297


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