Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_02671 and RBAM_016220

See DNA alignment / Visit BSNT_02671 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:33
# Commandline: needle
#    -asequence pep-align/BSNT_02671___flhB.1.9828.seq
#    -bsequence pep-align/RBAM_016220___flhB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02671___flhB-RBAM_016220___flhB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02671___flhB-RBAM_016220___flhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02671___flhB
# 2: RBAM_016220___flhB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 360
# Identity:     312/360 (86.7%)
# Similarity:   344/360 (95.6%)
# Gaps:           1/360 ( 0.3%)
# Score: 1607.0
# 
#
#=======================================

BSNT_02671___      1 MKLRVDLQFFAGEKTEKATPKKRKDTRKKGQVAKSSDVNTAVSLLVIFLS     50
                     |:||::|||||||||||||||||||||||||||||:|||||||||:||||
RBAM_016220__      1 MRLRLNLQFFAGEKTEKATPKKRKDTRKKGQVAKSTDVNTAVSLLIIFLS     50

BSNT_02671___     51 LIAIGPYMRDRLLSFIETFYTESLTMKLSESNVHTLFVSLLKDMGIILAP    100
                     |||:||||||||||||:||||:|:::.||.|.||.|||..:||:.:||||
RBAM_016220__     51 LIALGPYMRDRLLSFIKTFYTKSISLHLSASAVHELFVDTVKDISLILAP    100

BSNT_02671___    101 ILLVALVAGVVSNYMQVGFLFSAEVIQPKLEKLDPIKGFKRIYSMRAIVE    150
                     |:|||||||||||||||||||||||::|.|.||.|:||||||||||||||
RBAM_016220__    101 IMLVALVAGVVSNYMQVGFLFSAEVLKPDLNKLSPLKGFKRIYSMRAIVE    150

BSNT_02671___    151 LIKSILKIVVVGFAAFAVLWLHYGEILRLPLLTPEEALSFVSKLTLWMGL    200
                     |:||||||.|||||||.|||||||:|||||||||.|.|:|||||||||||
RBAM_016220__    151 LVKSILKITVVGFAAFMVLWLHYGDILRLPLLTPAEVLTFVSKLTLWMGL    200

BSNT_02671___    201 SGAGALLILAGLDYLYQRFDYEKNIKMSKQDIKDEYKKSEGDPIIKSKIK    250
                     :|:|||::|||||||||||||||||:||||||||||||||||||||||||
RBAM_016220__    201 AGSGALMLLAGLDYLYQRFDYEKNIRMSKQDIKDEYKKSEGDPIIKSKIK    250

BSNT_02671___    251 QRQREMAMRRMMQEVPKADVIITNPTHYAIALKYDEEKMDAPYIVAKGVD    300
                     |:||||||||||||||||||||||||||||||||||:|||||||||||||
RBAM_016220__    251 QKQREMAMRRMMQEVPKADVIITNPTHYAIALKYDEKKMDAPYIVAKGVD    300

BSNT_02671___    301 HLALKIRKIAKEHDVMMVENRPLARALYDQVEIDQAVPEEFFKVLAEILA    350
                     |||||||:||||||||.:|||||||||||||:||||||||||||:|||||
RBAM_016220__    301 HLALKIRQIAKEHDVMTIENRPLARALYDQVDIDQAVPEEFFKVIAEILA    350

BSNT_02671___    351 YVYKTKQKVY    360
                     ||||||||| 
RBAM_016220__    351 YVYKTKQKV-    359


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.