Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02670 and RBAM_016210

See DNA alignment / Visit BSNT_02670 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:33
# Commandline: needle
#    -asequence pep-align/BSNT_02670.1.9828.seq
#    -bsequence pep-align/RBAM_016210___fliR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02670-RBAM_016210___fliR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02670-RBAM_016210___fliR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02670
# 2: RBAM_016210___fliR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity:     167/259 (64.5%)
# Similarity:   185/259 (71.4%)
# Gaps:          65/259 (25.1%)
# Score: 847.0
# 
#
#=======================================

BSNT_02670         0 --------------------------------------------------      0
                                                                       
RBAM_016210__      1 MNSIIDLFPAFLLVFIRISAFFVTVPVFGHRNLPAVHRIGFAFFLSVICF     50

BSNT_02670         1 ---------------MLLAFKEALVGLCLGLIAYMMIAAVQIAGSFIDFQ     35
                                    |||..|||:|||.|||||:||:.|:||||||||||
RBAM_016210__     51 STLKHAPEIEIGEQYMLLVIKEAVVGLSLGLIAFMMMTAIQIAGSFIDFQ    100

BSNT_02670        36 MGFSIANVIDPQTGAQSPLIGQFIYTMALLFMLSVNAHHLLLDGIYYSFQ     85
                     ||||||||||||:|.||||||||:||:|||||||:|||:|||||||||||
RBAM_016210__    101 MGFSIANVIDPQSGTQSPLIGQFVYTLALLFMLSINAHYLLLDGIYYSFQ    150

BSNT_02670        86 YISVDQAFPNFGDEKFAYFIAKSFNAMFIIAFQMSAPVVASLFLVDLALG    135
                     ||.:|||||:||::.|..||||||||||||||||||||||||||||||||
RBAM_016210__    151 YIPLDQAFPSFGNDHFGLFIAKSFNAMFIIAFQMSAPVVASLFLVDLALG    200

BSNT_02670       136 IVARTVPQLNVFVVGLPLKIAVSFIMLIVCMSVIFVVVRNVFSLTIETMR    185
                     |||||||||||||||||||||||||||||||:|:||||||:||||:||||
RBAM_016210__    201 IVARTVPQLNVFVVGLPLKIAVSFIMLIVCMAVMFVVVRNIFSLTVETMR    250

BSNT_02670       186 NLLALVGVS    194
                     ||||||||:
RBAM_016210__    251 NLLALVGVT    259


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