Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02667 and RBAM_016200

See DNA alignment / Visit BSNT_02667 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:33
# Commandline: needle
#    -asequence pep-align/BSNT_02667___fliQ.1.9828.seq
#    -bsequence pep-align/RBAM_016200___fliQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02667___fliQ-RBAM_016200___fliQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02667___fliQ-RBAM_016200___fliQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02667___fliQ
# 2: RBAM_016200___fliQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      75/89 (84.3%)
# Similarity:    80/89 (89.9%)
# Gaps:           8/89 ( 9.0%)
# Score: 371.0
# 
#
#=======================================

BSNT_02667___      1 --------MAEKAVYVTLMISGPLLAIALLVGLIVSIFQATTQIQEQTLA     42
                             |||||||||||||||||||||:|||:||||||||||||||||
RBAM_016200__      1 MSSEFVISMAEKAVYVTLMISGPLLAIALIVGLLVSIFQATTQIQEQTLA     50

BSNT_02667___     43 FIPKIVAVLLALIFFGPWMLSTILSFTTELFSNLNRFAG     81
                     ||||||||:|.|||||||||||||||||:|||:||||||
RBAM_016200__     51 FIPKIVAVMLGLIFFGPWMLSTILSFTTDLFSHLNRFAG     89


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