Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02667 and RBAM_016200

See Amino acid alignment / Visit BSNT_02667 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:33
# Commandline: needle
#    -asequence dna-align/BSNT_02667___fliQ.1.9828.seq
#    -bsequence dna-align/RBAM_016200___fliQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02667___fliQ-RBAM_016200___fliQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02667___fliQ-RBAM_016200___fliQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02667___fliQ
# 2: RBAM_016200___fliQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     200/270 (74.1%)
# Similarity:   200/270 (74.1%)
# Gaps:          24/270 ( 8.9%)
# Score: 816.0
# 
#
#=======================================

BSNT_02667___      1 ------------------------ATGGCGGAAAAAGCCGTATACGTAAC     26
                                             ||||||||||||||||||||.|||||
RBAM_016200__      1 GTGAGTTCAGAATTTGTAATTTCCATGGCGGAAAAAGCCGTATATGTAAC     50

BSNT_02667___     27 GCTGATGATCAGCGGGCCATTATTGGCTATTGCTTTACTGGTCGGTTTAA     76
                     .||.||||||||||||||..|..|.||.||.||..|..|.||||||||..
RBAM_016200__     51 ACTAATGATCAGCGGGCCGCTGCTTGCGATCGCGCTGATCGTCGGTTTGC    100

BSNT_02667___     77 TTGTCAGCATATTTCAGGCGACAACTCAAATCCAGGAACAGACTTTGGCG    126
                     |.|||||.||.|||||.||||||||||||||||||||||||||..|.|||
RBAM_016200__    101 TCGTCAGTATCTTTCAAGCGACAACTCAAATCCAGGAACAGACGCTTGCG    150

BSNT_02667___    127 TTTATTCCGAAAATCGTGGCGGTTCTCCTGGCTCTCATTTTTTTTGGTCC    176
                     ||.||||||||||||||||||||..|.||.|..||.||.|||||.|||||
RBAM_016200__    151 TTCATTCCGAAAATCGTGGCGGTGATGCTTGGACTGATCTTTTTCGGTCC    200

BSNT_02667___    177 GTGGATGCTGTCGACGATTCTTTCATTTACAACAGAGCTGTTTTCTAATT    226
                     .|||||||||||||||||||||||.||.|||||.||.|||||.|||.||.
RBAM_016200__    201 TTGGATGCTGTCGACGATTCTTTCGTTCACAACTGATCTGTTCTCTCATC    250

BSNT_02667___    227 TAAATCGTTTTGCAGGGTAA    246
                     |.||.||.|||||||||||.
RBAM_016200__    251 TGAACCGATTTGCAGGGTAG    270


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