Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02655 and RBAM_016110

See DNA alignment / Visit BSNT_02655 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:32
# Commandline: needle
#    -asequence pep-align/BSNT_02655___flgD.1.9828.seq
#    -bsequence pep-align/RBAM_016110___flgD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02655___flgD-RBAM_016110___flgD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02655___flgD-RBAM_016110___flgD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02655___flgD
# 2: RBAM_016110___flgD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:      95/149 (63.8%)
# Similarity:   118/149 (79.2%)
# Gaps:          12/149 ( 8.1%)
# Score: 474.5
# 
#
#=======================================

BSNT_02655___      1 MTSISSEYKL-------PEKTNTVSTNNSSLGKDEFLKILMTQVQNQDPL     43
                     |||::|:|..       ..|:.|...::::||||||||||||||||||||
RBAM_016110__      1 MTSVNSDYAAAGASTTSSAKSTTAVNSSTNLGKDEFLKILMTQVQNQDPL     50

BSNT_02655___     44 NPVDDKEFISQMATFSSLEQMMNLNTTMTQFVENQDPFTTYVDWMGKEVS     93
                     |||||||||||||||||||||||:|||||:|||||||||.||:|:||.|:
RBAM_016110__     51 NPVDDKEFISQMATFSSLEQMMNMNTTMTKFVENQDPFTMYVNWIGKNVT    100

BSNT_02655___     94 W--TDGKSATDKTGTVSSVKHFKGNYYLVLDDGTEISPANVMSVGQSSK    140
                     :  :|||   |:|..|:||||..|||.|||::|.|:||.||.:|.::||
RBAM_016110__    101 FSDSDGK---DQTSPVNSVKHSNGNYVLVLENGKEVSPWNVTAVSETSK    146


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