Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02652 and RBAM_016100
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence pep-align/BSNT_02652.1.9828.seq
# -bsequence pep-align/RBAM_016100___fliK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02652-RBAM_016100___fliK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02652-RBAM_016100___fliK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02652
# 2: RBAM_016100___fliK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 510
# Identity: 216/510 (42.4%)
# Similarity: 287/510 (56.3%)
# Gaps: 85/510 (16.7%)
# Score: 907.5
#
#
#=======================================
BSNT_02652 1 MKLLELAGPLLQTTTGSAAKNMKSSQGVFQNWLMSEAGLKELSEQGKGTP 50
||||||.|...||...|..|...:|.|:|||||:|| :....:.|..|.
RBAM_016100__ 1 MKLLELTGNRTQTVQNSNVKMNVNSLGLFQNWLLSE--ITSPRQPGDETK 48
BSNT_02652 51 NSEDQLLADALKKIGEWLNASPEDQDKQNANLLQTLSKLTGKQLDANALQ 100
.| |..|.|||.|||:||.|.|||::.|...||:.:..|.|||....|..
RBAM_016100__ 49 TS-DAELNDALSKIGDWLKAGPEDKELQLKQLLEAVKALEGKQTAETAHP 97
BSNT_02652 101 MLQNLLQAVKSKMSGGTDQLLTDTEKIFSEAKTALSANDSASDINGALKS 150
:|:.|.::|:..::|....:..:|::..|.||. .||..| ||:
RBAM_016100__ 98 LLKQLAESVEDMLAGKQHGVKPETDEPDSSAKD----GDSVKD---ALE- 139
BSNT_02652 151 DTEQSNHENEVSEPAKELIYIQMFISQL-VEGNNLTDRGNGNEAHAIYQN 199
|.|::||..:||| .....|.|.. :|.|:||.
RBAM_016100__ 140 ---------------KGLLFIQEAVSQLFTSQQELPDSA---QAKAVYQE 171
BSNT_02652 200 GDQFLSALEKKGVSQQIIQDLKQQIFTKAESSSKLYSMTASELKSFQSLM 249
|.:.|.||:|:||..::||||:|..|.|.||:||||||||:|||||||:.
RBAM_016100__ 172 GARLLEALKKQGVPDRVIQDLRQTFFPKNESASKLYSMTAAELKSFQSVA 221
BSNT_02652 250 DQMSMLPQKGTKEWSLAESQLKAFLLSKSSESSQDFGKRVLTPLSQSLSS 299
:|::.|.|||||||.:||::||.|:||:||||||:...:. ..
RBAM_016100__ 222 EQLAGLSQKGTKEWDMAETELKVFVLSQSSESSQESAGKT--------EQ 263
BSNT_02652 300 KNASDVSGSIQPVDSKSGLQMLFSGYRSIGGVQTLDLQQMSSDIPN--TE 347
:|...||.:..| |||....:||||.||:.|: ||.|:.... .|
RBAM_016100__ 264 QNGGTVSHAKAP-DSKLSAHILFSGTRSLAGI-----QQTSAGAEQQPAE 307
BSNT_02652 348 TKTVADQVINAWKQMKYTPFGRSTGSFTIRLNPEHLGFVTIKLTNENGMF 397
.|.:.||||:.||||||||||::|||||||||||:|||||||:|||||||
RBAM_016100__ 308 NKPLTDQVISGWKQMKYTPFGKTTGSFTIRLNPENLGFVTIKVTNENGMF 357
BSNT_02652 398 QSKIIASSQSAKELLEQHLPQLKQSLPNMAVQIDRFTLPVQSGDQPIY-- 445
|||||||||||||||||||||||||||||:.:......|.::|...::
RBAM_016100__ 358 QSKIIASSQSAKELLEQHLPQLKQSLPNMSARSTVLQSPFKAGISSLFTG 407
BSNT_02652 446 -------GQLADEQKQQQEGQR-----------QQRQKKQSNDFGDLLDE 477
..:.|.:.::....: ..:.:|.|
RBAM_016100__ 408 RRPITINSSIRDRESRRTSSSQAISEICWRSFLSMKWRKNS--------- 448
BSNT_02652 478 VSMVEMEEEE 487
RBAM_016100__ 448 ---------- 448
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