Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02650 and RBAM_016090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence pep-align/BSNT_02650___ylxF.1.9828.seq
# -bsequence pep-align/RBAM_016090___ylxF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02650___ylxF-RBAM_016090___ylxF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02650___ylxF-RBAM_016090___ylxF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02650___ylxF
# 2: RBAM_016090___ylxF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 206
# Identity: 133/206 (64.6%)
# Similarity: 166/206 (80.6%)
# Gaps: 4/206 ( 1.9%)
# Score: 660.5
#
#
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BSNT_02650___ 1 MSGKKKESGKFRSVLLIIILPLMFLLIAGGIVLWAAGINVIKPIQDAAAK 50
|:.|:|.||||.|:||.|::||:||:|...|:|||||::|:||||:.|||
RBAM_016090__ 1 MADKEKRSGKFGSILLFIMIPLIFLIIVASIILWAAGVDVMKPIQETAAK 50
BSNT_02650___ 51 TPVLKELVPETENKKGAASSKDSSNTAALEKTIKDQKSEISILNKDLETS 100
|||||||||||:..|.||..:....||:||||||:|||||:||||||:||
RBAM_016090__ 51 TPVLKELVPETKEMKSAAEKQKEDRTASLEKTIKEQKSEINILNKDLDTS 100
BSNT_02650___ 101 KSEIDRLNQKIRSLEKTAEDQKKSSEDHTEGSADSKASSENDKVISVYKS 150
|||||.||||||||::.||.|:|:..|.|: .|:..|:..||:|::|||
RBAM_016090__ 101 KSEIDNLNQKIRSLKQEAEQQQKTKTDETK--KDAADSAGKDKMINIYKS 148
BSNT_02650___ 151 MDSGKAAKIIAQLKEQEALKILNGLSKKQLADILAKMTPEQAATYTEKIA 200
|||||||.||.:|||:|||.|||||||||||:||.||||||||.||||::
RBAM_016090__ 149 MDSGKAASIIVKLKEKEALDILNGLSKKQLAEILTKMTPEQAAKYTEKLS 198
BSNT_02650___ 201 ASQE-- 204
|...
RBAM_016090__ 199 ADGNKE 204
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