Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02646 and RBAM_016060
See
DNA alignment /
Visit
BSNT_02646 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence pep-align/BSNT_02646.1.9828.seq
# -bsequence pep-align/RBAM_016060___fliH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02646-RBAM_016060___fliH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02646-RBAM_016060___fliH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02646
# 2: RBAM_016060___fliH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity: 151/250 (60.4%)
# Similarity: 178/250 (71.2%)
# Gaps: 42/250 (16.8%)
# Score: 781.0
#
#
#=======================================
BSNT_02646 1 MSNIIKQESSISPQKEKRKLSIQEVRIDHSHLLQAEENSEALMARVKEEA 50
||..|.||
RBAM_016060__ 1 ------------------------------------------MAFAKAEA 8
BSNT_02646 51 DRISEQANSHIENIRRQIEQEKNDWAAEKQKLIEEAKTEGFEQGVALGKA 100
||:||:|.:..|:..||||:|||.||.|||:||||||.||:|:|:|||||
RBAM_016060__ 9 DRVSEEAKNQFEHTLRQIEEEKNRWAEEKQRLIEEAKAEGYEEGMALGKA 58
BSNT_02646 101 EALQQYAELIGQANSITEMSRKAVEDKLEDANEEIVELAVALAKKVWQQK 150
||..:||.||.:||::.||:|::||:|||.|.|||:||:||||||||:||
RBAM_016060__ 59 EAQAEYANLISRANAVMEMARQSVEEKLESAEEEIIELSVALAKKVWRQK 108
BSNT_02646 151 SDDKEAFLLLVQQVINEVKEYDDISIYVDPYYYETIFQQKDEIQQLLYKE 200
|||||||||||:||:.|||:||||||||||.||.|:.|..||||||||||
RBAM_016060__ 109 SDDKEAFLLLVKQVVAEVKDYDDISIYVDPEYYVTVHQHMDEIQQLLYKE 158
BSNT_02646 201 CRLGIYADEKAQKGTCYIETPFGRVDASVDTQLMQLKDKLLTALEAGAAE 250
|||.:||||||.||||.||||||||||.:||||||||.||||||||||.:
RBAM_016060__ 159 CRLSLYADEKAAKGTCSIETPFGRVDAGIDTQLMQLKQKLLTALEAGAEQ 208
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.