Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02644 and RBAM_016040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:31
# Commandline: needle
# -asequence pep-align/BSNT_02644.1.9828.seq
# -bsequence pep-align/RBAM_016040___fliF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02644-RBAM_016040___fliF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02644-RBAM_016040___fliF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02644
# 2: RBAM_016040___fliF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 536
# Identity: 262/536 (48.9%)
# Similarity: 292/536 (54.5%)
# Gaps: 213/536 (39.7%)
# Score: 1359.0
#
#
#=======================================
BSNT_02644 0 -------------------------------------------------- 0
RBAM_016040__ 1 MNRTLMQMKTKTAAFWNNRSKTQKILMVSGLAAFIILLIVVIIFTSSEKM 50
BSNT_02644 0 -------------------------------------------------- 0
RBAM_016040__ 51 VPLYKDLSAEEAGKIKEELDTKKVSSELADGGTVIKVPESQVDSLKVQLA 100
BSNT_02644 0 -------------------------------------------------- 0
RBAM_016040__ 101 AEGLPKTGSIDYSFFGQNAGFGLTDNEFDVLKVEATQTELSNLINEMDGI 150
BSNT_02644 0 -------------------------------------------------- 0
RBAM_016040__ 151 KSSKVMINMPKEAVFVGEDQPAASASIVLQMKPGYSLDQNQINGLYHLVS 200
BSNT_02644 1 -------------MDQNSTYYDKSDSDAGSYADSYSSQQGIKSQVEKDIQ 37
|||||||||||||.|||.:|||:||||||||||||||
RBAM_016040__ 201 KSVPNLKEDNIVIMDQNSTYYDKSDSGAGSVSDSYASQQGIKSQVEKDIQ 250
BSNT_02644 38 KHVQSLLGTMMGQDKVVVSVTADIDFTKENRTEDIVEPVDKENMEGIAVS 87
|||||||||||||||||||||||:|||||.||||.||||||:||||||||
RBAM_016040__ 251 KHVQSLLGTMMGQDKVVVSVTADVDFTKEKRTEDTVEPVDKDNMEGIAVS 300
BSNT_02644 88 AEKVSETYQGDGAANGGTAGTGEEDVTNYKADGENTESGNYEKNSNKINY 137
||||:|||:|||||||||||||..|..||......:.||:|||:||||||
RBAM_016040__ 301 AEKVAETYKGDGAANGGTAGTGSNDTANYAETNGGSNSGDYEKSSNKINY 350
BSNT_02644 138 EVNRIHKEIAESPYKVRDLGIQVMVEPPDAKNTASLSTERQDEIQKILST 187
||||||||||||||||||||||||||||:.||.||||.:||.:|||||.|
RBAM_016040__ 351 EVNRIHKEIAESPYKVRDLGIQVMVEPPNPKNAASLSAQRQADIQKILGT 400
BSNT_02644 188 VVRTSLDKDETQNQNLSDADINNKIVVSVQPFDGKVNLDTNTEKSSGIPL 237
||||||||:|||||||:|.||||||||||||||||.:|:|::.:|||:|:
RBAM_016040__ 401 VVRTSLDKNETQNQNLTDNDINNKIVVSVQPFDGKTSLNTDSAQSSGLPI 450
BSNT_02644 238 WAYIVGGVLIAAIIVLIIMLIRKKRAQEDEFEEYEYEVPQEPINLPDINE 287
|.||.||||:||||:|||:||||||:||||:||||||.|.||:.||||||
RBAM_016040__ 451 WVYITGGVLLAAIILLIILLIRKKRSQEDEYEEYEYETPPEPVRLPDINE 500
BSNT_02644 288 EENETAESVRRKQLEKMAKDKPEDFAKLLRSWLAED 323
|:.||.|:|||||||||||:|||||||||||||.||
RBAM_016040__ 501 EKIETEETVRRKQLEKMAKEKPEDFAKLLRSWLDED 536
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