Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02644 and RBAM_016040

See DNA alignment / Visit BSNT_02644 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:31
# Commandline: needle
#    -asequence pep-align/BSNT_02644.1.9828.seq
#    -bsequence pep-align/RBAM_016040___fliF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02644-RBAM_016040___fliF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02644-RBAM_016040___fliF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02644
# 2: RBAM_016040___fliF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 536
# Identity:     262/536 (48.9%)
# Similarity:   292/536 (54.5%)
# Gaps:         213/536 (39.7%)
# Score: 1359.0
# 
#
#=======================================

BSNT_02644         0 --------------------------------------------------      0
                                                                       
RBAM_016040__      1 MNRTLMQMKTKTAAFWNNRSKTQKILMVSGLAAFIILLIVVIIFTSSEKM     50

BSNT_02644         0 --------------------------------------------------      0
                                                                       
RBAM_016040__     51 VPLYKDLSAEEAGKIKEELDTKKVSSELADGGTVIKVPESQVDSLKVQLA    100

BSNT_02644         0 --------------------------------------------------      0
                                                                       
RBAM_016040__    101 AEGLPKTGSIDYSFFGQNAGFGLTDNEFDVLKVEATQTELSNLINEMDGI    150

BSNT_02644         0 --------------------------------------------------      0
                                                                       
RBAM_016040__    151 KSSKVMINMPKEAVFVGEDQPAASASIVLQMKPGYSLDQNQINGLYHLVS    200

BSNT_02644         1 -------------MDQNSTYYDKSDSDAGSYADSYSSQQGIKSQVEKDIQ     37
                                  |||||||||||||.|||.:|||:||||||||||||||
RBAM_016040__    201 KSVPNLKEDNIVIMDQNSTYYDKSDSGAGSVSDSYASQQGIKSQVEKDIQ    250

BSNT_02644        38 KHVQSLLGTMMGQDKVVVSVTADIDFTKENRTEDIVEPVDKENMEGIAVS     87
                     |||||||||||||||||||||||:|||||.||||.||||||:||||||||
RBAM_016040__    251 KHVQSLLGTMMGQDKVVVSVTADVDFTKEKRTEDTVEPVDKDNMEGIAVS    300

BSNT_02644        88 AEKVSETYQGDGAANGGTAGTGEEDVTNYKADGENTESGNYEKNSNKINY    137
                     ||||:|||:|||||||||||||..|..||......:.||:|||:||||||
RBAM_016040__    301 AEKVAETYKGDGAANGGTAGTGSNDTANYAETNGGSNSGDYEKSSNKINY    350

BSNT_02644       138 EVNRIHKEIAESPYKVRDLGIQVMVEPPDAKNTASLSTERQDEIQKILST    187
                     ||||||||||||||||||||||||||||:.||.||||.:||.:|||||.|
RBAM_016040__    351 EVNRIHKEIAESPYKVRDLGIQVMVEPPNPKNAASLSAQRQADIQKILGT    400

BSNT_02644       188 VVRTSLDKDETQNQNLSDADINNKIVVSVQPFDGKVNLDTNTEKSSGIPL    237
                     ||||||||:|||||||:|.||||||||||||||||.:|:|::.:|||:|:
RBAM_016040__    401 VVRTSLDKNETQNQNLTDNDINNKIVVSVQPFDGKTSLNTDSAQSSGLPI    450

BSNT_02644       238 WAYIVGGVLIAAIIVLIIMLIRKKRAQEDEFEEYEYEVPQEPINLPDINE    287
                     |.||.||||:||||:|||:||||||:||||:||||||.|.||:.||||||
RBAM_016040__    451 WVYITGGVLLAAIILLIILLIRKKRSQEDEYEEYEYETPPEPVRLPDINE    500

BSNT_02644       288 EENETAESVRRKQLEKMAKDKPEDFAKLLRSWLAED    323
                     |:.||.|:|||||||||||:|||||||||||||.||
RBAM_016040__    501 EKIETEETVRRKQLEKMAKEKPEDFAKLLRSWLDED    536


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