Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02642 and RBAM_016030

See DNA alignment / Visit BSNT_02642 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:31
# Commandline: needle
#    -asequence pep-align/BSNT_02642___fliE.1.9828.seq
#    -bsequence pep-align/RBAM_016030___fliE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02642___fliE-RBAM_016030___fliE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02642___fliE-RBAM_016030___fliE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02642___fliE
# 2: RBAM_016030___fliE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 106
# Identity:      92/106 (86.8%)
# Similarity:    99/106 (93.4%)
# Gaps:           0/106 ( 0.0%)
# Score: 456.0
# 
#
#=======================================

BSNT_02642___      1 MINAISPFQVQNTQNTQNATNQVNNSQKTDSSNQTSFSELLKNSISSLNE     50
                     |:|||:|||:|.||||||.|||:|.:|||||||||||||||||||.||||
RBAM_016030__      1 MVNAITPFQLQQTQNTQNVTNQLNQTQKTDSSNQTSFSELLKNSIDSLNE     50

BSNT_02642___     51 SQVASDNMTNALAAGKDVNLDEVMIAAQKASISLTAATEFRNKAVEAYQE    100
                     |||.||.:||.|||||||||||||||||||:|||||||||||||||||||
RBAM_016030__     51 SQVKSDQITNELAAGKDVNLDEVMIAAQKANISLTAATEFRNKAVEAYQE    100

BSNT_02642___    101 IMRMQM    106
                     ||||||
RBAM_016030__    101 IMRMQM    106


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