Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02642 and RBAM_016030
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:31
# Commandline: needle
# -asequence dna-align/BSNT_02642___fliE.1.9828.seq
# -bsequence dna-align/RBAM_016030___fliE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02642___fliE-RBAM_016030___fliE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02642___fliE-RBAM_016030___fliE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02642___fliE
# 2: RBAM_016030___fliE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity: 270/321 (84.1%)
# Similarity: 270/321 (84.1%)
# Gaps: 0/321 ( 0.0%)
# Score: 1146.0
#
#
#=======================================
BSNT_02642___ 1 GTGATTAATGCAATTTCTCCTTTTCAGGTTCAAAATACTCAAAACACTCA 50
|||.||||.||.|||.|||||||||||.|||||.|.||.|||||||||||
RBAM_016030__ 1 GTGGTTAACGCTATTACTCCTTTTCAGCTTCAACAAACCCAAAACACTCA 50
BSNT_02642___ 51 AAATGCAACAAATCAAGTAAACAATAGCCAAAAAACAGATTCTTCAAATC 100
|||.|.|||.||||||.|||||.|.|..||||||||.|||||||||||.|
RBAM_016030__ 51 AAACGTAACGAATCAATTAAACCAAACTCAAAAAACTGATTCTTCAAACC 100
BSNT_02642___ 101 AAACAAGCTTTTCGGAGCTTTTAAAAAACTCTATTAGTTCGTTAAATGAG 150
|||||||||||||||||||||||||||||||||||..|||||||||||||
RBAM_016030__ 101 AAACAAGCTTTTCGGAGCTTTTAAAAAACTCTATTGATTCGTTAAATGAG 150
BSNT_02642___ 151 TCCCAAGTAGCTTCTGACAACATGACTAATGCCTTGGCTGCAGGAAAAGA 200
||.||||||...||||||.|.||.||.||.|...|||||||||||||.||
RBAM_016030__ 151 TCACAAGTAAAATCTGACCAAATAACGAACGAACTGGCTGCAGGAAAGGA 200
BSNT_02642___ 201 TGTAAATCTTGATGAGGTCATGATCGCTGCTCAAAAAGCTAGCATCTCTC 250
||||||.|||||.|||||||||||||||||.||||||||.|..||.||||
RBAM_016030__ 201 TGTAAACCTTGACGAGGTCATGATCGCTGCCCAAAAAGCAAATATTTCTC 250
BSNT_02642___ 251 TAACTGCAGCAACAGAGTTCCGCAATAAAGCTGTGGAAGCTTATCAGGAG 300
|.||.||.||.||.||.||||||||||||||.||||||||.||||||||.
RBAM_016030__ 251 TGACGGCCGCTACCGAATTCCGCAATAAAGCCGTGGAAGCCTATCAGGAA 300
BSNT_02642___ 301 ATTATGAGAATGCAAATGTAG 321
||.|||||||||||.||||||
RBAM_016030__ 301 ATCATGAGAATGCAGATGTAG 321
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