Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02630 and RBAM_015940

See DNA alignment / Visit BSNT_02630 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:30
# Commandline: needle
#    -asequence pep-align/BSNT_02630___smf.1.9828.seq
#    -bsequence pep-align/RBAM_015940___smf.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02630___smf-RBAM_015940___smf.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02630___smf-RBAM_015940___smf.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02630___smf
# 2: RBAM_015940___smf
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     212/299 (70.9%)
# Similarity:   247/299 (82.6%)
# Gaps:           2/299 ( 0.7%)
# Score: 1094.0
# 
#
#=======================================

BSNT_02630___      1 MDQAAACLTICRINQLLSPSLLLKWWKADPSMS-LTSP-VLQTVTRDQIK     48
                     ||||:.||.:|.|||::||||||||||||.|:| |..| .|..::..:..
RBAM_015940__      1 MDQASRCLMVCSINQIISPSLLLKWWKADHSLSFLPHPHPLTVLSEGKTA     50

BSNT_02630___     49 AAALKNEIEQFYPKLPRVLAAYREQGINTIPISSKQYPFWLKSIYDPPAV     98
                     ..|:..|||:..|:|..||:.||.:||..|||||..||.|||:|||||||
RBAM_015940__     51 PEAIFREIERKDPELDEVLSDYRREGITVIPISSSCYPTWLKAIYDPPAV    100

BSNT_02630___     99 LFAKGDMTLLSKGRKIGIVGTRNPTAYGKQVVNHLTKEICRKGWVIVSGL    148
                     |:|||:..||.|||||||||||.||..|.:.|.||:.|:.:|||||||||
RBAM_015940__    101 LYAKGNTLLLEKGRKIGIVGTRKPTEDGIKAVGHLSAELSKKGWVIVSGL    150

BSNT_02630___    149 ASGIDGMSHAASIKAKGRTIGVIAGGFQHIYPRENLQLADHMAKHHILLS    198
                     ||||||:||.|||:|||.|||||||||.||||||||.||::||:||:|||
RBAM_015940__    151 ASGIDGLSHKASIRAKGLTIGVIAGGFHHIYPRENLLLAEYMAEHHLLLS    200

BSNT_02630___    199 EHPPETKPQKWHFPMRNRIISGLSEGVIVVQGKEKSGSLITAYQALEQGR    248
                     ||||||||:|||||||||||||||||::||||||||||||||||||:|||
RBAM_015940__    201 EHPPETKPKKWHFPMRNRIISGLSEGIVVVQGKEKSGSLITAYQALDQGR    250

BSNT_02630___    249 EVFAVPGSLFDPYAGGPIKLIQQGAKAIWSAEDIFEELPERNVQYTEPF    297
                     ||||||||:|:||:||||||||:||||:..||||..||..|.|||||||
RBAM_015940__    251 EVFAVPGSIFNPYSGGPIKLIQEGAKAVLCAEDIDGELTARCVQYTEPF    299


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