Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02630 and RBAM_015940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:30
# Commandline: needle
# -asequence dna-align/BSNT_02630___smf.1.9828.seq
# -bsequence dna-align/RBAM_015940___smf.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02630___smf-RBAM_015940___smf.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02630___smf-RBAM_015940___smf.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02630___smf
# 2: RBAM_015940___smf
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 950
# Identity: 651/950 (68.5%)
# Similarity: 651/950 (68.5%)
# Gaps: 106/950 (11.2%)
# Score: 2183.0
#
#
#=======================================
BSNT_02630___ 1 TTGGATCAGGC--CGCTGCCTGCCTAACGATTTGCAGAATCAATC-AATT 47
||||||||.|| ||| .|||..|||.|.|.|||||.||.|||| |||.
RBAM_015940__ 1 TTGGATCAAGCATCGC--GCTGTTTAATGGTCTGCAGTATTAATCAAATC 48
BSNT_02630___ 48 ATTATCCCCATCCCTTCTATTAAAATGGTGGAAAGCCGATCCGTCTATGT 97
||| |||||.||.|||||||||||||||||||||||.||||..|||.|||
RBAM_015940__ 49 ATT-TCCCCGTCTCTTCTATTAAAATGGTGGAAAGCTGATCATTCTCTGT 97
BSNT_02630___ 98 CGCTGACATCACCTGTGTTACAAACGGTTACTCGTGATCAAATAAAAGCA 147
||.|.|||| ||..|.|.| |||.|.|||
RBAM_015940__ 98 ------------CTTTTTTAC---CGCATCCGC---ATCCATTAA----- 124
BSNT_02630___ 148 GCTGCATTA--AAAAACGAAATA--------GAA-CAATTTTATC----- 181
|||..||| |.||..|||| | ||| ||||||| ||
RBAM_015940__ 125 -CTGTTTTATCAGAAGGGAAA-ACAGCCCCGGAAGCAATTTT-TCGGGAA 171
BSNT_02630___ 182 --------CAAAGCTCCCGCGTGTACTTG------------CTGCTTATC 211
|||.|.||| .|.||||| |.|.|||.|
RBAM_015940__ 172 ATAGAGCGCAAGGATCC----GGAACTTGATGAAGTTCTGTCCGATTACC 217
BSNT_02630___ 212 GTGAGC-AAGGCATTAACACCATCCCTATTTCTTCAA--AGCAATATCCT 258
| ..|| |||||||||....|||.||.|||||.|||| .|| |||||.
RBAM_015940__ 218 G-CCGCGAAGGCATTACTGTCATTCCGATTTCATCAAGCTGC--TATCCA 264
BSNT_02630___ 259 TTCTGGCTTAAAAGC-ATTTATGATCCCCCTGCCGTACTGTTTGCAAAAG 307
...|||||| ||||| |||||||||||.||.||.||.||||.||||||||
RBAM_015940__ 265 ACATGGCTT-AAAGCGATTTATGATCCGCCGGCTGTCCTGTATGCAAAAG 313
BSNT_02630___ 308 GTGATATGACT-CTTCTTTCGAAAGGGAGAAAAATTGGAATTGTAGGGAC 356
|..|.|.| || ||||||...|||||.||||||||.||.||||||||.||
RBAM_015940__ 314 GGAACACG-CTGCTTCTTGAAAAAGGCAGAAAAATCGGGATTGTAGGAAC 362
BSNT_02630___ 357 AAGAAATCCAACAGCTTATGGGAAACAAGTTGTCAATCATCTT------- 399
..|.||.||.||.|...|.||.|.|.|||..||....||||||
RBAM_015940__ 363 GCGGAAACCGACGGAAGACGGAATAAAAGCGGTTGGGCATCTTTCCGCCG 412
BSNT_02630___ 400 -----ACAAAAGAGATCTGTCGTAAAGGTTGGGTGATTGTCAGCGGACTG 444
.||||| |||||.|||||.|||||.|||||.||.
RBAM_015940__ 413 AACTCTCAAAA------------AAAGGCTGGGTCATTGTAAGCGGGCTT 450
BSNT_02630___ 445 GCGTCTGGGATAGACGGAATGTCCCATGCTGCAAGTATTAAGGCGAAGGG 494
||.||.||.|||||||||.||||.|||...||.||.||.|.|||.||.||
RBAM_015940__ 451 GCATCCGGTATAGACGGATTGTCTCATAAGGCGAGCATCAGGGCAAAAGG 500
BSNT_02630___ 495 GCGGACAATTGGCGTCATTGCAGGCGGATTTCAACACATTTATCCCCGAG 544
||..||.||.|||||.||.||.||||||||.||.|||||.||||||||.|
RBAM_015940__ 501 GCTTACGATCGGCGTGATAGCCGGCGGATTCCATCACATCTATCCCCGGG 550
BSNT_02630___ 545 AAAACCTTCAGTTAGCAGATCACATGGCTAAACACCATATCCTGCTGTCA 594
||||.||.|.|||||||||..||||||||.||||||||.||||.||.|||
RBAM_015940__ 551 AAAATCTCCTGTTAGCAGAATACATGGCTGAACACCATCTCCTACTCTCA 600
BSNT_02630___ 595 GAGCACCCACCTGAAACGAAACCCCAAAAATGGCATTTCCCTATGAGAAA 644
||.||.||.||||||||.||.||..||||||||||.||.||.||||||||
RBAM_015940__ 601 GAACATCCTCCTGAAACAAAGCCGAAAAAATGGCACTTTCCGATGAGAAA 650
BSNT_02630___ 645 CCGTATTATCAGCGGACTAAGTGAAGGCGTTATTGTCGTTCAGGGCAAAG 694
|||.||.||||||||||||||||||||..||.|.|||||.|||||.||||
RBAM_015940__ 651 CCGCATAATCAGCGGACTAAGTGAAGGAATTGTGGTCGTGCAGGGAAAAG 700
BSNT_02630___ 695 AAAAAAGCGGTTCGCTGATTACTGCCTATCAAGCATTGGAACAAGGGAGA 744
|||||||||||||..|.||.||.||.||.||.||..|.||.|||||.|||
RBAM_015940__ 701 AAAAAAGCGGTTCATTAATCACAGCTTACCAGGCTCTCGATCAAGGCAGA 750
BSNT_02630___ 745 GAGGTATTTGCCGTACCCGGTTCATTGTTTGACCCTTACGCCGGAGGTCC 794
||||||||||||||.||.|||||..|.|||.|.||.||..|||||||.||
RBAM_015940__ 751 GAGGTATTTGCCGTTCCGGGTTCCATATTTAATCCATATTCCGGAGGACC 800
BSNT_02630___ 795 TATAAAACTGATCCAGCAGGGGGCTAAAGCCATATGGTCAGCAGAGGATA 844
|||||||||.||.||..|.|||||.|||||..|||..|..||||||||||
RBAM_015940__ 801 TATAAAACTCATTCAAGAAGGGGCGAAAGCTGTATTATGCGCAGAGGATA 850
BSNT_02630___ 845 TTTTCGAGGAACTTCCTGAGAGAAACGTTCAATATACGGAACCCTTTTGA 894
||..||..||.||..|.|...||..||||||.||||||||||||||||||
RBAM_015940__ 851 TTGACGGAGAGCTGACCGCCCGATGCGTTCAGTATACGGAACCCTTTTGA 900
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