Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02629 and RBAM_015930

See DNA alignment / Visit BSNT_02629 in genome browser / Return to Orthologue table 
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:30
# Commandline: needle
#    -asequence pep-align/BSNT_02629___sucD.1.9828.seq
#    -bsequence pep-align/RBAM_015930___sucD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02629___sucD-RBAM_015930___sucD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02629___sucD-RBAM_015930___sucD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02629___sucD
# 2: RBAM_015930___sucD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     292/300 (97.3%)
# Similarity:   298/300 (99.3%)
# Gaps:           0/300 ( 0.0%)
# Score: 1521.0
# 
#
#=======================================

BSNT_02629___      1 MSVFINKDTRVIVQGITGSTALFHTKQMLEYGTNIVGGVTPGKGGTEAEG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015930__      1 MSVFINKDTRVIVQGITGSTALFHTKQMLEYGTNIVGGVTPGKGGTEAEG     50

BSNT_02629___     51 VPVFNTVAEAVQTTGANASVIYVPAPFAADAIMEAVDAELDLVICITEHI    100
                     |||||||||||.||||:||||||||||||||||||||||:||||||||||
RBAM_015930__     51 VPVFNTVAEAVHTTGADASVIYVPAPFAADAIMEAVDAEIDLVICITEHI    100

BSNT_02629___    101 PVLDMVKVKRFMEGKKTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGV    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015930__    101 PVLDMVKVKRFMEGKKTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGV    150

BSNT_02629___    151 VSRSGTLTYEAVHQLSEAGVGQSTAVGIGGDPVNGTNFIDVLKAFNEDPD    200
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
RBAM_015930__    151 VSRSGTLTYEAVHQLSEAGVGQSTAVGIGGDPVNGTNFIDVLKAFNEDPE    200

BSNT_02629___    201 THAVIMIGEIGGTAEEEAAEWVKANMTKPVVGFIGGKTAPPGKRMGHAGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015930__    201 THAVIMIGEIGGTAEEEAAEWVKANMTKPVVGFIGGKTAPPGKRMGHAGA    250

BSNT_02629___    251 IISGGKGTADEKIKTLNACGIEVAETPSVMGETLIKVLKEKNLFETCKTH    300
                     |||||||||:||:||:|||||||||||||||||||||||||.||||||||
RBAM_015930__    251 IISGGKGTAEEKVKTMNACGIEVAETPSVMGETLIKVLKEKGLFETCKTH    300


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