Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02629 and RBAM_015930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:30
# Commandline: needle
# -asequence dna-align/BSNT_02629___sucD.1.9828.seq
# -bsequence dna-align/RBAM_015930___sucD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02629___sucD-RBAM_015930___sucD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02629___sucD-RBAM_015930___sucD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02629___sucD
# 2: RBAM_015930___sucD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 903
# Identity: 765/903 (84.7%)
# Similarity: 765/903 (84.7%)
# Gaps: 0/903 ( 0.0%)
# Score: 3273.0
#
#
#=======================================
BSNT_02629___ 1 ATGAGTGTTTTCATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTAC 50
|||||||||||.||.|||||||||||||||||||||||.||.||||||||
RBAM_015930__ 1 ATGAGTGTTTTTATCAATAAAGATACAAGAGTTATTGTACAGGGGATTAC 50
BSNT_02629___ 51 AGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAA 100
||||||||||||||||||||||||.|||||||||||.|||||||||||.|
RBAM_015930__ 51 AGGTTCTACCGCTTTATTTCATACAAAGCAGATGCTGGAATACGGCACGA 100
BSNT_02629___ 101 ATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGT 150
|||||||||||||||||||||||||||||||||||||.|||||||||||.
RBAM_015930__ 101 ATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACGGAAGCGGAAGGC 150
BSNT_02629___ 151 GTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAA 200
||.||.|||||.|||||.||.||.|||||.|||||.|||||.||||||.|
RBAM_015930__ 151 GTACCGGTATTCAATACGGTCGCAGAAGCGGTTCATACAACGGGCGCTGA 200
BSNT_02629___ 201 CGCGTCTGTTATATATGTGCCCGCACCGTTTGCAGCTGATGCGATTATGG 250
.|||||.|||||.||.|||||.||.||||||||.||.||.||.|||||||
RBAM_015930__ 201 TGCGTCAGTTATTTACGTGCCGGCTCCGTTTGCGGCGGACGCAATTATGG 250
BSNT_02629___ 251 AAGCGGTAGATGCGGAGCTTGATCTCGTGATTTGTATCACAGAACATATC 300
|||||||.||.|||||..|||||||.||.|||||||||||.||.||.||.
RBAM_015930__ 251 AAGCGGTTGACGCGGAAATTGATCTTGTCATTTGTATCACTGAGCACATT 300
BSNT_02629___ 301 CCGGTTTTGGATATGGTGAAGGTCAAACGCTTCATGGAAGGCAAGAAAAC 350
|||||||||||.||||||||.||.||.|||||.|||||||||||||||||
RBAM_015930__ 301 CCGGTTTTGGACATGGTGAAAGTGAAGCGCTTTATGGAAGGCAAGAAAAC 350
BSNT_02629___ 351 GAGACTGATAGGGCCGAACTGTCCTGGTGTCATTACGCCTGAAGAATGTA 400
||||.|.||||||||||||||.||.|||||.|||||.|||||||||||.|
RBAM_015930__ 351 GAGATTAATAGGGCCGAACTGCCCGGGTGTTATTACACCTGAAGAATGCA 400
BSNT_02629___ 401 AAATCGGCATTATGCCCGGATACATCCATAAAAAGGGTCATGTAGGCGTT 450
|.||||||||||||||.||||||||.||||||||||||||||||||||||
RBAM_015930__ 401 AGATCGGCATTATGCCGGGATACATTCATAAAAAGGGTCATGTAGGCGTT 450
BSNT_02629___ 451 GTATCACGTTCAGGGACATTAACATACGAAGCGGTGCACCAGCTCTCAGA 500
|||||.||||||||.|||||.||||||||.||.||.||.|||||.|||||
RBAM_015930__ 451 GTATCCCGTTCAGGAACATTGACATACGAGGCCGTCCATCAGCTTTCAGA 500
BSNT_02629___ 501 AGCGGGTGTAGGGCAATCTACAGCTGTTGGAATCGGCGGCGACCCTGTAA 550
|||.||.|||||.||||||||.|||||.||.|||||||||||.||.||.|
RBAM_015930__ 501 AGCCGGCGTAGGCCAATCTACCGCTGTAGGGATCGGCGGCGATCCGGTCA 550
BSNT_02629___ 551 ATGGAACAAACTTTATTGACGTTTTAAAAGCGTTTAACGAAGATCCTGAC 600
|.||.||.|||||||||||.||.|||||||||||.||.||||||||.||.
RBAM_015930__ 551 ACGGCACGAACTTTATTGATGTGTTAAAAGCGTTCAATGAAGATCCAGAA 600
BSNT_02629___ 601 ACACACGCAGTCATCATGATTGGCGAAATCGGCGGTACGGCCGAAGAGGA 650
|||||.||.|||||||||||.||.|||||||||||.||.||.|||||.||
RBAM_015930__ 601 ACACATGCCGTCATCATGATCGGAGAAATCGGCGGCACAGCTGAAGAAGA 650
BSNT_02629___ 651 AGCGGCAGAGTGGGTAAAAGCCAACATGACAAAACCGGTAGTCGGTTTTA 700
||||||.||||||||.|||||.||||||||.||.||.||.|||||.||||
RBAM_015930__ 651 AGCGGCTGAGTGGGTGAAAGCGAACATGACGAAGCCTGTTGTCGGCTTTA 700
BSNT_02629___ 701 TCGGCGGTAAAACAGCACCTCCTGGGAAGCGCATGGGGCATGCAGGCGCC 750
|||||||||||||.||.|||||.||.||.||||||||.|||||.||||||
RBAM_015930__ 701 TCGGCGGTAAAACCGCGCCTCCGGGAAAACGCATGGGCCATGCGGGCGCC 750
BSNT_02629___ 751 ATTATTTCCGGCGGAAAAGGGACAGCTGATGAAAAAATCAAAACCCTTAA 800
||.||.|||||.||||||||.||.||.||.||||||.|||||||..|.||
RBAM_015930__ 751 ATCATCTCCGGAGGAAAAGGCACGGCAGAAGAAAAAGTCAAAACGATGAA 800
BSNT_02629___ 801 TGCATGCGGAATCGAAGTTGCAGAGACACCTTCTGTCATGGGTGAAACCT 850
.||.||||||||.|||||.||.||.||.||||||||.|||||||||||..
RBAM_015930__ 801 CGCCTGCGGAATTGAAGTCGCGGAAACCCCTTCTGTAATGGGTGAAACGC 850
BSNT_02629___ 851 TAATCAAGGTGCTGAAAGAGAAGAACTTGTTCGAAACTTGTAAAACGCAT 900
|.||.||||||.|.|||||.||...|||.||.|||||.||.||||||||.
RBAM_015930__ 851 TGATTAAGGTGTTAAAAGAAAAAGGCTTATTTGAAACGTGCAAAACGCAC 900
BSNT_02629___ 901 TAA 903
|.|
RBAM_015930__ 901 TGA 903
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