Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02625 and RBAM_015890

See DNA alignment / Visit BSNT_02625 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:29
# Commandline: needle
#    -asequence pep-align/BSNT_02625___rnhB.1.9828.seq
#    -bsequence pep-align/RBAM_015890___rnhB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02625___rnhB-RBAM_015890___rnhB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02625___rnhB-RBAM_015890___rnhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02625___rnhB
# 2: RBAM_015890___rnhB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     206/255 (80.8%)
# Similarity:   228/255 (89.4%)
# Gaps:           0/255 ( 0.0%)
# Score: 1075.0
# 
#
#=======================================

BSNT_02625___      1 MNTLTVKDIKDRLQEVKDAQDPFIAQCENDPRKSVQTLVEQWLKKQAKEK     50
                     |||||||.:|:|||||:|..|||:||||.|||||||||:||||||.||||
RBAM_015890__      1 MNTLTVKSVKERLQEVRDESDPFLAQCEKDPRKSVQTLLEQWLKKHAKEK     50

BSNT_02625___     51 ALKEQWVNMTSYERLARNKGFRLIAGVDEVGRGPLAGPVVASAVILPEEC    100
                     ||||||:|||:||||:..|||||||||||.|||||||||||.|||||.||
RBAM_015890__     51 ALKEQWLNMTAYERLSSKKGFRLIAGVDEAGRGPLAGPVVAGAVILPAEC    100

BSNT_02625___    101 EILGLTDSKKLSEKKREEYYELIMKEALAVGIGIVEATVIDEINIYEASK    150
                     |||||||||||||||.||||..|.:||.|||:|||.|.|||.||||||::
RBAM_015890__    101 EILGLTDSKKLSEKKLEEYYSRITEEAAAVGVGIVHADVIDRINIYEAAR    150

BSNT_02625___    151 MAMVKAIQDLSGTPDYLLVDAMTLPLDTAQASIIKGDAKSVSIAAGACIA    200
                     :|||||:..|:.|||||||||||||||..|:|:|||||||||||||||||
RBAM_015890__    151 LAMVKAVNALTETPDYLLVDAMTLPLDIPQSSVIKGDAKSVSIAAGACIA    200

BSNT_02625___    201 KVTRDRMMSAYAETYPMYGFEKNKGYGTKEHLEALAAYGPTELHRKTFAP    250
                     ||||||:|:.||:||||||||||||||||||||||.|||||.:|||||||
RBAM_015890__    201 KVTRDRLMAEYAKTYPMYGFEKNKGYGTKEHLEALQAYGPTTIHRKTFAP    250

BSNT_02625___    251 VQSFR    255
                     |||:.
RBAM_015890__    251 VQSYC    255


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