Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02623 and RBAM_015880

See DNA alignment / Visit BSNT_02623 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:29
# Commandline: needle
#    -asequence pep-align/BSNT_02623___rbgA.1.9828.seq
#    -bsequence pep-align/RBAM_015880___rbgA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02623___rbgA-RBAM_015880___rbgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02623___rbgA-RBAM_015880___rbgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02623___rbgA
# 2: RBAM_015880___rbgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     254/282 (90.1%)
# Similarity:   275/282 (97.5%)
# Gaps:           0/282 ( 0.0%)
# Score: 1330.0
# 
#
#=======================================

BSNT_02623___      1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKN     50
                     |||||||||||||||||||||||||||||||||||||||||||||:||||
RBAM_015880__      1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEEILKN     50

BSNT_02623___     51 KPRIMLLNKADKADAAVTQRWKEHFEKQGIRSLSINSVNGQGLNQIVPAS    100
                     ||||||||||||||||||.:||:||::|||.||||||||||||:||||:|
RBAM_015880__     51 KPRIMLLNKADKADAAVTAQWKDHFQEQGIPSLSINSVNGQGLHQIVPSS    100

BSNT_02623___    101 KEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKSTLINRLAKKNIAKTGD    150
                     ||:|::|||:|:|||::|||||||||||||||||||||||||||||||||
RBAM_015880__    101 KELLKDKFDKMKAKGIRPRAIRALIIGIPNVGKSTLINRLAKKNIAKTGD    150

BSNT_02623___    151 RPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLRLAVTGAIKDSII    200
                     ||||||||||||||||||||||||||||||||||||||||:||||||:||
RBAM_015880__    151 RPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLRLAITGAIKDTII    200

BSNT_02623___    201 NLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCLMS    250
                     ||||||||||||||||||:||||||||.|||||||.|||||||||||||.
RBAM_015880__    201 NLQDVAVFGLRFLEEHYPDRLKERYGLQEIPEDIAALFDAIGEKRGCLMG    250

BSNT_02623___    251 GGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM    282
                     ||:::|||||||||||||||||||||||.|:.
RBAM_015880__    251 GGMVDYDKTTEVIIRDIRTEKFGRLSFETPSE    282


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