Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02623 and RBAM_015880
See
Amino acid alignment /
Visit
BSNT_02623 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:29
# Commandline: needle
# -asequence dna-align/BSNT_02623___rbgA.1.9828.seq
# -bsequence dna-align/RBAM_015880___rbgA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02623___rbgA-RBAM_015880___rbgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02623___rbgA-RBAM_015880___rbgA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02623___rbgA
# 2: RBAM_015880___rbgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 854
# Identity: 663/854 (77.6%)
# Similarity: 663/854 (77.6%)
# Gaps: 10/854 ( 1.2%)
# Score: 2548.0
#
#
#=======================================
BSNT_02623___ 1 ATGACAATTCAATGGTTCCCGGGCCATATGGCAAAAGCAAGAAGGGAAGT 50
|||||.||||||||||||||.|||||||||||.|||||.|||.|||||||
RBAM_015880__ 1 ATGACCATTCAATGGTTCCCAGGCCATATGGCTAAAGCGAGACGGGAAGT 50
BSNT_02623___ 51 AACCGAAAAATTAAAATTAATCGATATCGTATATGAATTGGTAGATGCCA 100
|||.||||||.|.||||||||.|||||||||||.||||||||.|||||.|
RBAM_015880__ 51 AACAGAAAAACTGAAATTAATTGATATCGTATACGAATTGGTGGATGCGA 100
BSNT_02623___ 101 GAATTCCAATGTCATCAAGAAACCCAATGATTGAAGATATTCTAAAAAAC 150
||||.||.||||||||.|||||.||.||||||||.||.|||.|||||||.
RBAM_015880__ 101 GAATCCCGATGTCATCGAGAAATCCGATGATTGAGGAGATTTTAAAAAAT 150
BSNT_02623___ 151 AAGCCGCGAATTATGCTGTTAAACAAGGCTGACAAAGCAGATGCGGCAGT 200
||||||||.||||||||.|||||.||.||.||.||.||.||||||||.||
RBAM_015880__ 151 AAGCCGCGCATTATGCTTTTAAATAAAGCCGATAAGGCGGATGCGGCTGT 200
BSNT_02623___ 201 TACACAGCGGTGGAAAGAGCACTTTGAGAAGCAGGGGATCCGCTCTCTGT 250
.||....|.||||||.||.||||||.||.|.|||||.||.|.||||||.|
RBAM_015880__ 201 GACTGCTCAGTGGAAGGACCACTTTCAGGAACAGGGCATTCCCTCTCTTT 250
BSNT_02623___ 251 CTATTAATTCTGTAAATGGACAAGGGTTAAATCAAATTGTGCCTGCATCA 300
|.||.||.||.||.||.||.||.||..|..|||||||.|||||..|.|||
RBAM_015880__ 251 CAATAAACTCCGTTAACGGGCAGGGACTGCATCAAATCGTGCCGTCCTCA 300
BSNT_02623___ 301 AAAGAGATCCTCCAAGAAAAATTTGACCGGATGCGTGCGAAAGGTGTGAA 350
||||||.|.||..|.||.||.||.||....|||...||.||.||..|.|.
RBAM_015880__ 301 AAAGAGCTGCTGAAGGATAAGTTCGATAAAATGAAAGCAAAGGGCATTAG 350
BSNT_02623___ 351 GCCGAGAGCGATTCGCGCTTTGATTATCGGCATTCCAAACGTCGGAAAAT 400
|||||||||.||.|||||.||.||.|||||||||||.||.|||||.||.|
RBAM_015880__ 351 GCCGAGAGCAATCCGCGCATTAATCATCGGCATTCCGAATGTCGGCAAGT 400
BSNT_02623___ 401 CAACGCTCATCAACCGGCTTGCAAAGAAAAACATAGCAAAAACGGGAGAC 450
|.||||||||.||||||||.||.||.||||||||.||.||.|||||||||
RBAM_015880__ 401 CTACGCTCATTAACCGGCTGGCCAAAAAAAACATTGCCAAGACGGGAGAC 450
BSNT_02623___ 451 AGACCTGGTATTACGACCTCTCAACAGTGGGTCAAAGTTGGGAAAGAATT 500
||.||.||.|||||.||.||.||.||||||||.||.||.||.||.|||||
RBAM_015880__ 451 AGGCCCGGCATTACCACTTCACAGCAGTGGGTAAAGGTAGGCAAGGAATT 500
BSNT_02623___ 501 AGAGCTATTAGATACACCGGGAATTTTGTGGCCTAAATTTGAGGATGAGC 550
||||||..|.|||||||||||||||||.||||||||||||||.|||||||
RBAM_015880__ 501 AGAGCTGCTCGATACACCGGGAATTTTATGGCCTAAATTTGAAGATGAGC 550
BSNT_02623___ 551 TTGTCGGTTTGAGACTGGCAGTCACCGGGGCTATTAAAGACTCGATTATT 600
|||||||.|||.|.|||||..||||||||||.||||||||..|||||||.
RBAM_015880__ 551 TTGTCGGCTTGCGTCTGGCGATCACCGGGGCGATTAAAGATACGATTATC 600
BSNT_02623___ 601 AATTTGCAGGACGTGGCCGTGTTTGGTCTTCGTTTTCTCGAAGAACATTA 650
||..|||||||.||||||||.||.||.||.||.|||||.|||||.|||||
RBAM_015880__ 601 AACCTGCAGGATGTGGCCGTCTTCGGGCTGCGCTTTCTGGAAGAGCATTA 650
BSNT_02623___ 651 CCCAGAACGGCTT-AAAGAGCGTTATGGCCTTGATGAGATCCCAGAGGAC 699
.||.| ||.|||| ||.|||||.||.||.|||.|.||.|||||.|||||.
RBAM_015880__ 651 TCCCG-ACCGCTTGAAGGAGCGCTACGGACTTCAGGAAATCCCTGAGGAT 699
BSNT_02623___ 700 ATTGCCGAGCTGTTTGATGCAATAGGTGAAAAGCGGGGCTGTCTCATGAG 749
||.||||..||.||.||.||.||.||||||||.||.||||||.|.|||.|
RBAM_015880__ 700 ATCGCCGCTCTTTTCGACGCGATCGGTGAAAAACGCGGCTGTTTGATGGG 749
BSNT_02623___ 750 CGGTGGGCTCATCAACTACGATAAGACGACTGAAGTCATCATTCGCGATA 799
|||.||..|..|..||||.|||||.||.||.||||||||||||||.||.|
RBAM_015880__ 750 CGGCGGAATGGTTGACTATGATAAAACAACGGAAGTCATCATTCGGGACA 799
BSNT_02623___ 800 TTCGCACTGAAAAGTTCGGCAGGCTGTCATTTGAA----CAGCCGACGAT 845
|.||.||.|||||.|||||||||||.||||||||| ||.|.||
RBAM_015880__ 800 TCCGGACGGAAAAATTCGGCAGGCTTTCATTTGAAACACCATCAGA---- 845
BSNT_02623___ 846 GTAA 849
.|||
RBAM_015880__ 846 ATAA 849
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.