Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02620 and RBAM_015870

See DNA alignment / Visit BSNT_02620 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:29
# Commandline: needle
#    -asequence pep-align/BSNT_02620___rplS.1.9828.seq
#    -bsequence pep-align/RBAM_015870___rplS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02620___rplS-RBAM_015870___rplS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02620___rplS-RBAM_015870___rplS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02620___rplS
# 2: RBAM_015870___rplS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 115
# Identity:     114/115 (99.1%)
# Similarity:   115/115 (100.0%)
# Gaps:           0/115 ( 0.0%)
# Score: 574.0
# 
#
#=======================================

BSNT_02620___      1 MQKLIEDITKEQLRTDLPAFRPGDTLRVHVKVVEGNRERIQIFEGVVIKR     50
                     |||||:||||||||||||||||||||||||||||||||||||||||||||
RBAM_015870__      1 MQKLIQDITKEQLRTDLPAFRPGDTLRVHVKVVEGNRERIQIFEGVVIKR     50

BSNT_02620___     51 RGGGISETFTVRKISYGVGVERTFPVHTPKIAKIEVVRYGKVRRAKLYYL    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015870__     51 RGGGISETFTVRKISYGVGVERTFPVHTPKIAKIEVVRYGKVRRAKLYYL    100

BSNT_02620___    101 RELRGKAARIKEIRR    115
                     |||||||||||||||
RBAM_015870__    101 RELRGKAARIKEIRR    115


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