Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02620 and RBAM_015870

See Amino acid alignment / Visit BSNT_02620 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:29
# Commandline: needle
#    -asequence dna-align/BSNT_02620___rplS.1.9828.seq
#    -bsequence dna-align/RBAM_015870___rplS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02620___rplS-RBAM_015870___rplS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02620___rplS-RBAM_015870___rplS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02620___rplS
# 2: RBAM_015870___rplS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 348
# Identity:     337/348 (96.8%)
# Similarity:   337/348 (96.8%)
# Gaps:           0/348 ( 0.0%)
# Score: 1641.0
# 
#
#=======================================

BSNT_02620___      1 ATGCAAAAACTAATTGAAGATATCACAAAAGAACAGCTTCGTACTGATCT     50
                     |||||||||||||||.|||||||||||||||||||||||||.||||||||
RBAM_015870__      1 ATGCAAAAACTAATTCAAGATATCACAAAAGAACAGCTTCGCACTGATCT     50

BSNT_02620___     51 TCCTGCGTTCCGTCCTGGTGACACTTTACGTGTACACGTTAAAGTTGTTG    100
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
RBAM_015870__     51 TCCTGCGTTCCGTCCTGGTGACACTTTACGTGTACACGTAAAAGTTGTTG    100

BSNT_02620___    101 AGGGTAACCGTGAGCGTATCCAGATCTTTGAAGGTGTTGTGATTAAGCGT    150
                     ||||||||||||||||||||||||||||.||||||||||||||.||||||
RBAM_015870__    101 AGGGTAACCGTGAGCGTATCCAGATCTTCGAAGGTGTTGTGATCAAGCGT    150

BSNT_02620___    151 CGTGGTGGTGGAATCAGCGAAACGTTCACAGTTCGTAAGATTTCTTACGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015870__    151 CGTGGTGGTGGAATCAGCGAAACGTTCACAGTTCGTAAGATTTCTTACGG    200

BSNT_02620___    201 TGTTGGCGTTGAACGTACTTTCCCAGTACACACACCAAAAATCGCGAAAA    250
                     ||||||||||||||||||.|||||.|||||||||||||||||||||||||
RBAM_015870__    201 TGTTGGCGTTGAACGTACATTCCCTGTACACACACCAAAAATCGCGAAAA    250

BSNT_02620___    251 TCGAAGTTGTACGTTACGGTAAAGTACGCCGTGCTAAACTTTACTACCTG    300
                     ||||||||||||||||||||||||||||.||.|||||.||||||||||||
RBAM_015870__    251 TCGAAGTTGTACGTTACGGTAAAGTACGTCGCGCTAAGCTTTACTACCTG    300

BSNT_02620___    301 CGTGAACTTCGCGGAAAAGCGGCTCGTATTAAAGAGATCAGACGATAA    348
                     |||||||||||||||||||||||||||||||||||.||||||||||||
RBAM_015870__    301 CGTGAACTTCGCGGAAAAGCGGCTCGTATTAAAGAAATCAGACGATAA    348


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