Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02619 and RBAM_015860

See DNA alignment / Visit BSNT_02619 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:29
# Commandline: needle
#    -asequence pep-align/BSNT_02619___trmD.1.9828.seq
#    -bsequence pep-align/RBAM_015860___trmD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02619___trmD-RBAM_015860___trmD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02619___trmD-RBAM_015860___trmD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02619___trmD
# 2: RBAM_015860___trmD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     216/243 (88.9%)
# Similarity:   234/243 (96.3%)
# Gaps:           0/243 ( 0.0%)
# Score: 1168.0
# 
#
#=======================================

BSNT_02619___      1 MKIDFLTLFPEMFEGVLGSSILQKAQEKDAVQFQVVNFREYSDNKHNTVD     50
                     |||||||||||||:||||||||||||||:||:|.|:|||.:|||||.|||
RBAM_015860__      1 MKIDFLTLFPEMFQGVLGSSILQKAQEKEAVRFDVINFRAFSDNKHQTVD     50

BSNT_02619___     51 DYPYGGGAGMVLKPQPVFDAVEDLTSKAAAAPRIILVCPQGERFTQKKAE    100
                     ||||||||||||||||||||||.||:...|.||||||||||||:||||||
RBAM_015860__     51 DYPYGGGAGMVLKPQPVFDAVEKLTAGTDAKPRIILVCPQGERYTQKKAE    100

BSNT_02619___    101 QLAKEEHLLFICGHYEGYDERIREHLVTDEISIGDFVLTGGELPAMMIAD    150
                     :||:||||:|||||||||||||||||||||||||||||||||||||||||
RBAM_015860__    101 ELAQEEHLMFICGHYEGYDERIREHLVTDEISIGDFVLTGGELPAMMIAD    150

BSNT_02619___    151 SVVRLLPGVLGKEASHIEDSFSTGLLEHPHYTRPADYKGLKVPETLLSGN    200
                     ||||||||||||||||:||||||||||||||||||||:||||||||||||
RBAM_015860__    151 SVVRLLPGVLGKEASHVEDSFSTGLLEHPHYTRPADYRGLKVPETLLSGN    200

BSNT_02619___    201 HAKIEEWRNKESIRRTYLRRPDLLKDYPLTEQQRKWISEWEKE    243
                     ||||::||||||||||:||||||||:||||::|||||||||.|
RBAM_015860__    201 HAKIQKWRNKESIRRTFLRRPDLLKNYPLTDEQRKWISEWENE    243


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