Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02619 and RBAM_015860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:29
# Commandline: needle
# -asequence dna-align/BSNT_02619___trmD.1.9828.seq
# -bsequence dna-align/RBAM_015860___trmD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02619___trmD-RBAM_015860___trmD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02619___trmD-RBAM_015860___trmD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02619___trmD
# 2: RBAM_015860___trmD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 742
# Identity: 582/742 (78.4%)
# Similarity: 582/742 (78.4%)
# Gaps: 20/742 ( 2.7%)
# Score: 2302.0
#
#
#=======================================
BSNT_02619___ 1 ATGAAAATCGACTTTTTGACGCTGTTTCCCGAAATGTTTGAAGGCGTGCT 50
|||||||||||||||||.||.||||||||||||||||||.||||.|||||
RBAM_015860__ 1 ATGAAAATCGACTTTTTAACACTGTTTCCCGAAATGTTTCAAGGGGTGCT 50
BSNT_02619___ 51 CGGCTCATCAATTCTTCAAAAAGCCCAGGAAAAAGATGCGGTGCAGTTTC 100
|||||||||.|||||.||||||||.|||||||||||.||.||.|..|||.
RBAM_015860__ 51 CGGCTCATCCATTCTGCAAAAAGCACAGGAAAAAGAGGCTGTCCGTTTTG 100
BSNT_02619___ 101 AAGTCGTAAATTTCCGGGAGTACTCTGATAACAAGCACAATACTGTTGAT 150
|.|||.|.||||||||||..|..||.|||||.||.|||.|.||.||||||
RBAM_015860__ 101 ACGTCATCAATTTCCGGGCTTTTTCGGATAATAAACACCAAACGGTTGAT 150
BSNT_02619___ 151 GATTATCCTTATGGCGGCGGGGCAGGCATGGTTCTCAAGCCTCAGCCTGT 200
|||||.||.||.|||||.||.||.||.|||||..|.|||||.||||||||
RBAM_015860__ 151 GATTACCCGTACGGCGGGGGAGCCGGGATGGTGTTAAAGCCGCAGCCTGT 200
BSNT_02619___ 201 TTTTGACGCGGTCGAGGACCTGACATCAAAGGCAGCCGCTGC-------- 242
.|||||.|||||.||..|.|||| ||||||.|.|
RBAM_015860__ 201 ATTTGATGCGGTTGAAAAGCTGA---------CAGCCGGTACGGACGCCA 241
BSNT_02619___ 243 -TCCGCGTATTATCCTCGTATGCCCGCAAGGTGAGCGTTTTACCCAAAAA 291
.|||||.|||||.|||||.|||||||||||||||||||.|||.||.||.
RBAM_015860__ 242 AGCCGCGCATTATTCTCGTCTGCCCGCAAGGTGAGCGTTATACGCAGAAG 291
BSNT_02619___ 292 AAAGCCGAGCAATTAGCAAAGGAAGAGCATTTGCTGTTCATTTGCGGCCA 341
|||||||||.|..|.|||.|.||.||.|||.|..||||.||||||||.||
RBAM_015860__ 292 AAAGCCGAGGAGCTGGCACAAGAGGAACATCTCATGTTTATTTGCGGACA 341
BSNT_02619___ 342 CTATGAAGGCTATGATGAACGCATTCGCGAGCA-CTTGGTAACGGATGAA 390
.||||||||.|||||||||||.||.||.||.|| ||| ||.||.||||||
RBAM_015860__ 342 TTATGAAGGGTATGATGAACGGATCCGGGAACATCTT-GTCACTGATGAA 390
BSNT_02619___ 391 ATATCAATTGGCGATTTTGTTCTGACGGGCGGTGAGCTCCCTGCAATGAT 440
||.||.||.||.||||||||.|||||.||.||.|||||||||||.|||||
RBAM_015860__ 391 ATCTCCATCGGGGATTTTGTGCTGACCGGGGGAGAGCTCCCTGCCATGAT 440
BSNT_02619___ 441 GATCGCAGACAGTGTGGTCAGACTGCTTCCGGGTGTACTGGGTAAAGAGG 490
|||.||.|||||.||.|||||.||..|.|||||.||.||.||.|||||.|
RBAM_015860__ 441 GATTGCCGACAGCGTTGTCAGGCTTTTGCCGGGCGTCCTCGGAAAAGAAG 490
BSNT_02619___ 491 CTTCCCATATTGAGGATTCCTTCAGCACCGGACTTTTAGAGCACCCGCAT 540
|.|||||..|.|||||||||||||||||.||.|||||||||||.|||||.
RBAM_015860__ 491 CATCCCACGTGGAGGATTCCTTCAGCACGGGGCTTTTAGAGCATCCGCAC 540
BSNT_02619___ 541 TATACAAGACCGGCAGATTACAAAGGTTTAAAAGTGCCTGAAACACTCTT 590
|||||.||.||.||||||||.|.|||.||||||||||||||.||.||..|
RBAM_015860__ 541 TATACGAGGCCTGCAGATTATAGAGGCTTAAAAGTGCCTGAGACCCTTCT 590
BSNT_02619___ 591 GTCAGGAAACCATGCAAAAATTGAAGAATGGCGGAATAAAGAATCGATCA 640
|||.||.||||||||||||||..||.|||||||.|||||||||||.||||
RBAM_015860__ 591 GTCGGGCAACCATGCAAAAATACAAAAATGGCGCAATAAAGAATCAATCA 640
BSNT_02619___ 641 GAAGGACCTACCTAAGACGTCCGGATCTGTTGAAAGACTACCCGCTTACA 690
||||.||||...||||||||||.|||||..|.|||.||||.||.||.||.
RBAM_015860__ 641 GAAGAACCTTTTTAAGACGTCCCGATCTTCTTAAAAACTATCCTCTCACT 690
BSNT_02619___ 691 GAGCAGCAAAGAAAGTGGATTTCTGAATGGGAAAAAGAATAG 732
||..||||||||||.||||||||.||.||||||||.||||||
RBAM_015860__ 691 GATGAGCAAAGAAAATGGATTTCCGAGTGGGAAAACGAATAG 732
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