Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02617 and RBAM_015840

See DNA alignment / Visit BSNT_02617 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:29
# Commandline: needle
#    -asequence pep-align/BSNT_02617___ylqD.1.9828.seq
#    -bsequence pep-align/RBAM_015840___ylqD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02617___ylqD-RBAM_015840___ylqD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02617___ylqD-RBAM_015840___ylqD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02617___ylqD
# 2: RBAM_015840___ylqD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:     106/128 (82.8%)
# Similarity:   117/128 (91.4%)
# Gaps:           0/128 ( 0.0%)
# Score: 542.0
# 
#
#=======================================

BSNT_02617___      1 MQIIHRVAVMQVLTERSKEKLLASFAEKKQMLERECSQLYFQLRKHEKEQ     50
                     |||||||.|||||||:||||||||||||||.|||||||||||||||||:|
RBAM_015840__      1 MQIIHRVTVMQVLTEQSKEKLLASFAEKKQTLERECSQLYFQLRKHEKDQ     50

BSNT_02617___     51 QNPDMIEQFKKAIEKRKDDIKIIDFQIAQVHTLPLGSELKEKEVDALLTI    100
                     ||||:.|.||||||||:|.||:|||||:|..:||||||:||||:||||:|
RBAM_015840__     51 QNPDVAESFKKAIEKRQDKIKMIDFQISQTESLPLGSEVKEKEIDALLSI    100

BSNT_02617___    101 EAGDDWHEKTAANTIVIKDGKVIEIRQR    128
                     ..||:|||||||||||||||.|||||.|
RBAM_015840__    101 NVGDNWHEKTAANTIVIKDGVVIEIRPR    128


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