Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02616 and RBAM_015830

See DNA alignment / Visit BSNT_02616 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:29
# Commandline: needle
#    -asequence pep-align/BSNT_02616___ylqC.1.9828.seq
#    -bsequence pep-align/RBAM_015830___ylqC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02616___ylqC-RBAM_015830___ylqC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02616___ylqC-RBAM_015830___ylqC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02616___ylqC
# 2: RBAM_015830___ylqC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 81
# Identity:      70/81 (86.4%)
# Similarity:    76/81 (93.8%)
# Gaps:           0/81 ( 0.0%)
# Score: 350.0
# 
#
#=======================================

BSNT_02616___      1 MTDQHLEDLIVHIVTPLVDHPDDIRVIREETDQKIALRLSVHKSDTGKVI     50
                     ||||:||||||.||.||||||:||.|.:|||||||||||||:||||||:|
RBAM_015830__      1 MTDQNLEDLIVSIVAPLVDHPEDITVTKEETDQKIALRLSVNKSDTGKII     50

BSNT_02616___     51 GKQGRTAKAIRTAVFAAGAQSSKKVQFEIFD     81
                     |||||||:||||.||||||||||||||||||
RBAM_015830__     51 GKQGRTARAIRTVVFAAGAQSSKKVQFEIFD     81


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