Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02604 and RBAM_015720

See DNA alignment / Visit BSNT_02604 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:27
# Commandline: needle
#    -asequence pep-align/BSNT_02604___plsX.1.9828.seq
#    -bsequence pep-align/RBAM_015720___plsX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02604___plsX-RBAM_015720___plsX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02604___plsX-RBAM_015720___plsX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02604___plsX
# 2: RBAM_015720___plsX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     291/333 (87.4%)
# Similarity:   318/333 (95.5%)
# Gaps:           1/333 ( 0.3%)
# Score: 1488.0
# 
#
#=======================================

BSNT_02604___      1 MRIAVDAMGGDHAPKAVIDGVIKGIEAFDDLHITLVGDKTTIESHLTTTS     50
                     |||||||||||:|||||||||:|.||||||||||||||||||||||:|||
RBAM_015720__      1 MRIAVDAMGGDNAPKAVIDGVMKSIEAFDDLHITLVGDKTTIESHLSTTS     50

BSNT_02604___     51 DRITVLHADEVIEPTDEPVRAVRRKKNSSMVLMAQEVAENRADACISAGN    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015720__     51 DRITVLHADEVIEPTDEPVRAVRRKKNSSMVLMAQEVAENRADACISAGN    100

BSNT_02604___    101 TGALMTAGLFIVGRIKGIDRPALAPTLPTVSGDGFLLLDVGANVDAKPEH    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015720__    101 TGALMTAGLFIVGRIKGIDRPALAPTLPTVSGDGFLLLDVGANVDAKPEH    150

BSNT_02604___    151 LVQYAIMGSVYSQQVRGVTSPRVGLLNVGTEDKKGNELTKQTFQILKETA    200
                     ||||.||||||::||.|::||||||||||||:||||:|||:||::|||| 
RBAM_015720__    151 LVQYGIMGSVYARQVLGISSPRVGLLNVGTEEKKGNDLTKKTFELLKET-    199

BSNT_02604___    201 NINFIGNVEARDLLDDVADVVVTDGFTGNVTLKTLEGSALSIFKMMRDVM    250
                     |:||:|||||||||:..|||:||||||||||||||||||||||||::|.:
RBAM_015720__    200 NVNFVGNVEARDLLEGAADVIVTDGFTGNVTLKTLEGSALSIFKMLKDTL    249

BSNT_02604___    251 TSTLTSKLAAAVLKPKLKEMKMNMEYSNYGGASLFGLKAPVIKAHGSSDS    300
                     ||:..|||||.||||||.|||:.|:||.|||||||||||||:|||||||:
RBAM_015720__    250 TSSFVSKLAAGVLKPKLMEMKLKMDYSEYGGASLFGLKAPVVKAHGSSDA    299

BSNT_02604___    301 NAVFHAIRQAREMVSQNVAALIQEEVKEEKTDE    333
                     .||:||:|||||||||||||.|:||||||||||
RBAM_015720__    300 RAVYHALRQAREMVSQNVAAFIEEEVKEEKTDE    332


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