Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02604 and RBAM_015720

See Amino acid alignment / Visit BSNT_02604 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:27
# Commandline: needle
#    -asequence dna-align/BSNT_02604___plsX.1.9828.seq
#    -bsequence dna-align/RBAM_015720___plsX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02604___plsX-RBAM_015720___plsX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02604___plsX-RBAM_015720___plsX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02604___plsX
# 2: RBAM_015720___plsX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1002
# Identity:     799/1002 (79.7%)
# Similarity:   799/1002 (79.7%)
# Gaps:           3/1002 ( 0.3%)
# Score: 3184.0
# 
#
#=======================================

BSNT_02604___      1 ATGAGAATAGCTGTAGATGCAATGGGAGGAGACCACGCTCCCAAAGCTGT     50
                     ||||||||||||||||||||||||||.||.|||.||||.|||||||||||
RBAM_015720__      1 ATGAGAATAGCTGTAGATGCAATGGGGGGCGACAACGCACCCAAAGCTGT     50

BSNT_02604___     51 TATTGACGGAGTTATAAAAGGTATAGAGGCATTTGATGATCTCCATATCA    100
                     ||||||||||||.||.||..||||.|||||||||||.|||||.|||||.|
RBAM_015720__     51 TATTGACGGAGTAATGAAGAGTATTGAGGCATTTGACGATCTTCATATTA    100

BSNT_02604___    101 CACTTGTCGGTGACAAAACAACGATAGAATCACATTTAACAACTACATCA    150
                     |.||.|||||||||||.|||||||||||||||||.||..||||.||||||
RBAM_015720__    101 CGCTGGTCGGTGACAAGACAACGATAGAATCACACTTGTCAACAACATCA    150

BSNT_02604___    151 GATCGCATCACGGTGCTGCACGCAGATGAAGTGATTGAGCCTACGGATGA    200
                     ||.||||||||.|||.|||||||.||||||||||||||.||.||||||||
RBAM_015720__    151 GACCGCATCACTGTGTTGCACGCCGATGAAGTGATTGAACCGACGGATGA    200

BSNT_02604___    201 ACCTGTCCGTGCCGTGCGAAGAAAAAAGAACTCATCTATGGTTCTTATGG    250
                     |||.|||||.|||||.||.|||||.||.|||||.||||||||.||.||||
RBAM_015720__    201 ACCGGTCCGCGCCGTACGCAGAAAGAAAAACTCTTCTATGGTGCTGATGG    250

BSNT_02604___    251 CGCAGGAGGTTGCGGAAAACAGAGCTGACGCCTGCATTTCAGCAGGAAAT    300
                     |||||||.||.||.|||||||||||.|||||||||||.|||||.||.|||
RBAM_015720__    251 CGCAGGAAGTGGCTGAAAACAGAGCGGACGCCTGCATCTCAGCGGGGAAT    300

BSNT_02604___    301 ACCGGTGCATTAATGACAGCCGGTCTCTTTATTGTCGGAAGAATTAAAGG    350
                     ||.||.|||.|.||||||||.||.||.|||||.|||||.|||||||||||
RBAM_015720__    301 ACGGGCGCACTCATGACAGCGGGACTGTTTATCGTCGGCAGAATTAAAGG    350

BSNT_02604___    351 AATTGACCGTCCGGCGCTTGCCCCGACACTTCCGACTGTTTCGGGAGACG    400
                     |||.|||||.||.||||||||.|||||.||||||||.|||||.||.||||
RBAM_015720__    351 AATCGACCGGCCTGCGCTTGCGCCGACGCTTCCGACCGTTTCAGGCGACG    400

BSNT_02604___    401 GATTTCTTCTCCTTGATGTCGGCGCCAATGTCGATGCCAAACCGGAGCAC    450
                     |.||.|||||..|.||.||.||.||||||||||||||||||||||||||.
RBAM_015720__    401 GTTTCCTTCTTTTGGACGTGGGAGCCAATGTCGATGCCAAACCGGAGCAT    450

BSNT_02604___    451 CTCGTTCAATATGCCATCATGGGTTCTGTTTATTCTCAGCAAGTGCGCGG    500
                     |||||.||.||.|..||.|||||.|||||.|||.|.|.|||.||.|.|||
RBAM_015720__    451 CTCGTCCAGTACGGAATTATGGGATCTGTATATGCCCGGCAGGTTCTCGG    500

BSNT_02604___    501 TGTCACTTCACCGAGAGTCGGACTTTTAAATGTCGGAACAGAAGATAAAA    550
                     ..|||..||.||..|.||||||.|.|||||||||||.||.|||||.||.|
RBAM_015720__    501 AATCAGCTCGCCCCGCGTCGGATTGTTAAATGTCGGCACGGAAGAAAAGA    550

BSNT_02604___    551 AAGGAAACGAACTGACGAAGCAGACGTTTCAAATTTTAAAAGAAACAGCA    600
                     ||||||||||.|||||.||..||||||||.||.|.||||||||||   ||
RBAM_015720__    551 AAGGAAACGACCTGACAAAAAAGACGTTTGAACTATTAAAAGAAA---CA    597

BSNT_02604___    601 AACATCAATTTTATCGGAAACGTGGAAGCGCGAGACCTTTTAGATGATGT    650
                     |||.|.||||||.||||||||||.||.|||.|||||.|..|.||.|..|.
RBAM_015720__    598 AACGTGAATTTTGTCGGAAACGTTGAGGCGAGAGACTTGCTCGAAGGCGC    647

BSNT_02604___    651 GGCGGATGTTGTAGTAACAGACGGCTTTACCGGGAATGTTACACTCAAAA    700
                     .||.||.||..|.||.||||||||||||||.||.||.||.||..|.||||
RBAM_015720__    648 TGCTGACGTCATCGTCACAGACGGCTTTACGGGCAACGTCACGTTGAAAA    697

BSNT_02604___    701 CGCTGGAAGGCTCTGCGTTGTCTATTTTTAAAATGATGAGAGACGTAATG    750
                     |..|||||||.||.|||||.||.|||||.||||||.|||.|||...|.||
RBAM_015720__    698 CATTGGAAGGTTCAGCGTTATCGATTTTCAAAATGCTGAAAGATACACTG    747

BSNT_02604___    751 ACGTCTACTTTGACATCCAAGCTTGCAGCAGCTGTGCTGAAGCCAAAATT    800
                     ||.||.|.|||....||.|||||.|||||.|..|||||||||||.||..|
RBAM_015720__    748 ACTTCAAGTTTTGTTTCTAAGCTCGCAGCGGGAGTGCTGAAGCCGAAGCT    797

BSNT_02604___    801 GAAAGAAATGAAAATGAATATGGAGTATTCGAATTATGGCGGAGCAAGTC    850
                     ||..|||||||||.||||.|||||.|||||..|.||.|||||.||.||||
RBAM_015720__    798 GATGGAAATGAAACTGAAAATGGACTATTCTGAGTACGGCGGGGCGAGTC    847

BSNT_02604___    851 TTTTTGGCTTAAAAGCGCCTGTGATCAAGGCGCACGGCTCTTCAGATTCA    900
                     ||||.||.||.||||||||.||..|.||.||||||||||||||.||..||
RBAM_015720__    848 TTTTCGGTTTGAAAGCGCCCGTCGTTAAAGCGCACGGCTCTTCTGACGCA    897

BSNT_02604___    901 AATGCTGTATTCCATGCGATTCGGCAAGCAAGAGAGATGGTCAGCCAAAA    950
                     ...|||||.|.|||||||.|.||.||.||.|||||.||||||||||||||
RBAM_015720__    898 CGCGCTGTTTACCATGCGCTGCGCCAGGCGAGAGAAATGGTCAGCCAAAA    947

BSNT_02604___    951 TGTGGCTGCGCTCATTCAGGAAGAAGTGAAAGAAGAAAAAACAGATGAGT   1000
                     .|||||.||..|.||..|.||||||||.||||||||||||||||||||||
RBAM_015720__    948 CGTGGCCGCATTTATAGAAGAAGAAGTAAAAGAAGAAAAAACAGATGAGT    997

BSNT_02604___   1001 AG   1002
                     ||
RBAM_015720__    998 AG    999


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