Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02604 and RBAM_015720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:27
# Commandline: needle
# -asequence dna-align/BSNT_02604___plsX.1.9828.seq
# -bsequence dna-align/RBAM_015720___plsX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02604___plsX-RBAM_015720___plsX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02604___plsX-RBAM_015720___plsX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02604___plsX
# 2: RBAM_015720___plsX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1002
# Identity: 799/1002 (79.7%)
# Similarity: 799/1002 (79.7%)
# Gaps: 3/1002 ( 0.3%)
# Score: 3184.0
#
#
#=======================================
BSNT_02604___ 1 ATGAGAATAGCTGTAGATGCAATGGGAGGAGACCACGCTCCCAAAGCTGT 50
||||||||||||||||||||||||||.||.|||.||||.|||||||||||
RBAM_015720__ 1 ATGAGAATAGCTGTAGATGCAATGGGGGGCGACAACGCACCCAAAGCTGT 50
BSNT_02604___ 51 TATTGACGGAGTTATAAAAGGTATAGAGGCATTTGATGATCTCCATATCA 100
||||||||||||.||.||..||||.|||||||||||.|||||.|||||.|
RBAM_015720__ 51 TATTGACGGAGTAATGAAGAGTATTGAGGCATTTGACGATCTTCATATTA 100
BSNT_02604___ 101 CACTTGTCGGTGACAAAACAACGATAGAATCACATTTAACAACTACATCA 150
|.||.|||||||||||.|||||||||||||||||.||..||||.||||||
RBAM_015720__ 101 CGCTGGTCGGTGACAAGACAACGATAGAATCACACTTGTCAACAACATCA 150
BSNT_02604___ 151 GATCGCATCACGGTGCTGCACGCAGATGAAGTGATTGAGCCTACGGATGA 200
||.||||||||.|||.|||||||.||||||||||||||.||.||||||||
RBAM_015720__ 151 GACCGCATCACTGTGTTGCACGCCGATGAAGTGATTGAACCGACGGATGA 200
BSNT_02604___ 201 ACCTGTCCGTGCCGTGCGAAGAAAAAAGAACTCATCTATGGTTCTTATGG 250
|||.|||||.|||||.||.|||||.||.|||||.||||||||.||.||||
RBAM_015720__ 201 ACCGGTCCGCGCCGTACGCAGAAAGAAAAACTCTTCTATGGTGCTGATGG 250
BSNT_02604___ 251 CGCAGGAGGTTGCGGAAAACAGAGCTGACGCCTGCATTTCAGCAGGAAAT 300
|||||||.||.||.|||||||||||.|||||||||||.|||||.||.|||
RBAM_015720__ 251 CGCAGGAAGTGGCTGAAAACAGAGCGGACGCCTGCATCTCAGCGGGGAAT 300
BSNT_02604___ 301 ACCGGTGCATTAATGACAGCCGGTCTCTTTATTGTCGGAAGAATTAAAGG 350
||.||.|||.|.||||||||.||.||.|||||.|||||.|||||||||||
RBAM_015720__ 301 ACGGGCGCACTCATGACAGCGGGACTGTTTATCGTCGGCAGAATTAAAGG 350
BSNT_02604___ 351 AATTGACCGTCCGGCGCTTGCCCCGACACTTCCGACTGTTTCGGGAGACG 400
|||.|||||.||.||||||||.|||||.||||||||.|||||.||.||||
RBAM_015720__ 351 AATCGACCGGCCTGCGCTTGCGCCGACGCTTCCGACCGTTTCAGGCGACG 400
BSNT_02604___ 401 GATTTCTTCTCCTTGATGTCGGCGCCAATGTCGATGCCAAACCGGAGCAC 450
|.||.|||||..|.||.||.||.||||||||||||||||||||||||||.
RBAM_015720__ 401 GTTTCCTTCTTTTGGACGTGGGAGCCAATGTCGATGCCAAACCGGAGCAT 450
BSNT_02604___ 451 CTCGTTCAATATGCCATCATGGGTTCTGTTTATTCTCAGCAAGTGCGCGG 500
|||||.||.||.|..||.|||||.|||||.|||.|.|.|||.||.|.|||
RBAM_015720__ 451 CTCGTCCAGTACGGAATTATGGGATCTGTATATGCCCGGCAGGTTCTCGG 500
BSNT_02604___ 501 TGTCACTTCACCGAGAGTCGGACTTTTAAATGTCGGAACAGAAGATAAAA 550
..|||..||.||..|.||||||.|.|||||||||||.||.|||||.||.|
RBAM_015720__ 501 AATCAGCTCGCCCCGCGTCGGATTGTTAAATGTCGGCACGGAAGAAAAGA 550
BSNT_02604___ 551 AAGGAAACGAACTGACGAAGCAGACGTTTCAAATTTTAAAAGAAACAGCA 600
||||||||||.|||||.||..||||||||.||.|.|||||||||| ||
RBAM_015720__ 551 AAGGAAACGACCTGACAAAAAAGACGTTTGAACTATTAAAAGAAA---CA 597
BSNT_02604___ 601 AACATCAATTTTATCGGAAACGTGGAAGCGCGAGACCTTTTAGATGATGT 650
|||.|.||||||.||||||||||.||.|||.|||||.|..|.||.|..|.
RBAM_015720__ 598 AACGTGAATTTTGTCGGAAACGTTGAGGCGAGAGACTTGCTCGAAGGCGC 647
BSNT_02604___ 651 GGCGGATGTTGTAGTAACAGACGGCTTTACCGGGAATGTTACACTCAAAA 700
.||.||.||..|.||.||||||||||||||.||.||.||.||..|.||||
RBAM_015720__ 648 TGCTGACGTCATCGTCACAGACGGCTTTACGGGCAACGTCACGTTGAAAA 697
BSNT_02604___ 701 CGCTGGAAGGCTCTGCGTTGTCTATTTTTAAAATGATGAGAGACGTAATG 750
|..|||||||.||.|||||.||.|||||.||||||.|||.|||...|.||
RBAM_015720__ 698 CATTGGAAGGTTCAGCGTTATCGATTTTCAAAATGCTGAAAGATACACTG 747
BSNT_02604___ 751 ACGTCTACTTTGACATCCAAGCTTGCAGCAGCTGTGCTGAAGCCAAAATT 800
||.||.|.|||....||.|||||.|||||.|..|||||||||||.||..|
RBAM_015720__ 748 ACTTCAAGTTTTGTTTCTAAGCTCGCAGCGGGAGTGCTGAAGCCGAAGCT 797
BSNT_02604___ 801 GAAAGAAATGAAAATGAATATGGAGTATTCGAATTATGGCGGAGCAAGTC 850
||..|||||||||.||||.|||||.|||||..|.||.|||||.||.||||
RBAM_015720__ 798 GATGGAAATGAAACTGAAAATGGACTATTCTGAGTACGGCGGGGCGAGTC 847
BSNT_02604___ 851 TTTTTGGCTTAAAAGCGCCTGTGATCAAGGCGCACGGCTCTTCAGATTCA 900
||||.||.||.||||||||.||..|.||.||||||||||||||.||..||
RBAM_015720__ 848 TTTTCGGTTTGAAAGCGCCCGTCGTTAAAGCGCACGGCTCTTCTGACGCA 897
BSNT_02604___ 901 AATGCTGTATTCCATGCGATTCGGCAAGCAAGAGAGATGGTCAGCCAAAA 950
...|||||.|.|||||||.|.||.||.||.|||||.||||||||||||||
RBAM_015720__ 898 CGCGCTGTTTACCATGCGCTGCGCCAGGCGAGAGAAATGGTCAGCCAAAA 947
BSNT_02604___ 951 TGTGGCTGCGCTCATTCAGGAAGAAGTGAAAGAAGAAAAAACAGATGAGT 1000
.|||||.||..|.||..|.||||||||.||||||||||||||||||||||
RBAM_015720__ 948 CGTGGCCGCATTTATAGAAGAAGAAGTAAAAGAAGAAAAAACAGATGAGT 997
BSNT_02604___ 1001 AG 1002
||
RBAM_015720__ 998 AG 999
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