Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02603 and RBAM_015710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:27
# Commandline: needle
# -asequence pep-align/BSNT_02603___ylpC.1.9828.seq
# -bsequence pep-align/RBAM_015710___fapR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02603___ylpC-RBAM_015710___fapR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02603___ylpC-RBAM_015710___fapR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02603___ylpC
# 2: RBAM_015710___fapR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity: 172/188 (91.5%)
# Similarity: 185/188 (98.4%)
# Gaps: 0/188 ( 0.0%)
# Score: 850.0
#
#
#=======================================
BSNT_02603___ 1 MRRNKRERQELLQQTIQATPFITDEELAGKFGVSIQTIRLDRLELSIPEL 50
|||:|:|||:||||||::||||||||||||||||||||||||||||||||
RBAM_015710__ 1 MRRSKKERQKLLQQTIKSTPFITDEELAGKFGVSIQTIRLDRLELSIPEL 50
BSNT_02603___ 51 RERIKNVAEKTLEDEVKSLSLDEVIGEIIDLELDDQAISILEIKQEHVFS 100
|||||||||:||:|||||||||||||||||||||.|||||||:::|||||
RBAM_015710__ 51 RERIKNVAEQTLDDEVKSLSLDEVIGEIIDLELDGQAISILEVRREHVFS 100
BSNT_02603___ 101 RNQIARGHHLFAQANSLAVAVIDDELALTASADIRFTRQVKQGERVVAKA 150
||||||||||||||||||||||||||||||||:||||||||:||||||||
RBAM_015710__ 101 RNQIARGHHLFAQANSLAVAVIDDELALTASANIRFTRQVKEGERVVAKA 150
BSNT_02603___ 151 KVTAVEKEKGRTVVEVNSYVGEEIVFSGRFDMYRSKHS 188
|||||||||||||||||||||||:||||.|||||||.|
RBAM_015710__ 151 KVTAVEKEKGRTVVEVNSYVGEEVVFSGSFDMYRSKQS 188
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