Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02600 and RBAM_015680
See
DNA alignment /
Visit
BSNT_02600 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:27
# Commandline: needle
# -asequence pep-align/BSNT_02600___sdaAB.1.9828.seq
# -bsequence pep-align/RBAM_015680___sdaAB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02600___sdaAB-RBAM_015680___sdaAB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02600___sdaAB-RBAM_015680___sdaAB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02600___sdaAB
# 2: RBAM_015680___sdaAB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 220
# Identity: 201/220 (91.4%)
# Similarity: 210/220 (95.5%)
# Gaps: 0/220 ( 0.0%)
# Score: 1024.0
#
#
#=======================================
BSNT_02600___ 1 MKYRSVFDIIGPVMIGPSSSHTAGAARIGRVARSLFGREPERIIVSFYGS 50
||||||||||||||||||||||||||||||||||||.|||.||:||||||
RBAM_015680__ 1 MKYRSVFDIIGPVMIGPSSSHTAGAARIGRVARSLFRREPRRIVVSFYGS 50
BSNT_02600___ 51 FAETYKGHGTDVAIIGGLLDFDTFDERIKTAIQIAEAKGIDIEFRVEDAV 100
||||||||||||||||||||||||||||||||||||.|||.:|||.||||
RBAM_015680__ 51 FAETYKGHGTDVAIIGGLLDFDTFDERIKTAIQIAEEKGIYVEFRTEDAV 100
BSNT_02600___ 101 PVHPNTTKITISDEKGELELTGISIGGGKIEITELNGFELRLSGNHPAIL 150
||||||.:|.|||::|||.|||||||||||||||||||||||||||||||
RBAM_015680__ 101 PVHPNTARIVISDDEGELALTGISIGGGKIEITELNGFELRLSGNHPAIL 150
BSNT_02600___ 151 VVHNDKFGTIAGVANVLAKFSINVGHMEVARKDIGQLALMTIEVDQNIDD 200
|||||||||||||||||||||||||||||||||:||||||||||||||::
RBAM_015680__ 151 VVHNDKFGTIAGVANVLAKFSINVGHMEVARKDVGQLALMTIEVDQNIEE 200
BSNT_02600___ 201 HILDELSKLPNIIQVTKIAD 220
.:|||||.||||||||||||
RBAM_015680__ 201 EVLDELSTLPNIIQVTKIAD 220
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.