Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02600 and RBAM_015680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:27
# Commandline: needle
# -asequence dna-align/BSNT_02600___sdaAB.1.9828.seq
# -bsequence dna-align/RBAM_015680___sdaAB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02600___sdaAB-RBAM_015680___sdaAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02600___sdaAB-RBAM_015680___sdaAB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02600___sdaAB
# 2: RBAM_015680___sdaAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 664
# Identity: 533/664 (80.3%)
# Similarity: 533/664 (80.3%)
# Gaps: 2/664 ( 0.3%)
# Score: 2129.0
#
#
#=======================================
BSNT_02600___ 1 ATGAAATACAGAAGCGTTTTTGATATTATCGGCCCGGTTATGATCGGTCC 50
|||||.||.|||||||||||||||||||||||||||||.|||||||||||
RBAM_015680__ 1 ATGAAGTATAGAAGCGTTTTTGATATTATCGGCCCGGTAATGATCGGTCC 50
BSNT_02600___ 51 GTCCAGCTCTCATACAGCGGGAGCTGCTAGAATCGGGAGAGTGGCCAGAA 100
||||||.||.|||||.||.||.||.||..|.|||||.|||||||||||||
RBAM_015680__ 51 GTCCAGTTCACATACCGCAGGCGCCGCCCGGATCGGCAGAGTGGCCAGAA 100
BSNT_02600___ 101 GTTTATT-TGGCAGAGAGCCTGAGCGCATCATTGTATCTTTTTACGGCTC 149
|.||||| .||| |.|||||....||.|||.||||.|||||||||||.||
RBAM_015680__ 101 GCTTATTCAGGC-GGGAGCCCCGCCGGATCGTTGTGTCTTTTTACGGATC 149
BSNT_02600___ 150 GTTTGCGGAAACGTATAAGGGCCACGGCACAGATGTCGCGATTATCGGCG 199
.||||||||.|||||||||||.||||||||.|||||||||||||||||||
RBAM_015680__ 150 ATTTGCGGAGACGTATAAGGGTCACGGCACTGATGTCGCGATTATCGGCG 199
BSNT_02600___ 200 GATTGCTTGATTTTGATACATTCGATGAACGGATTAAAACCGCTATACAA 249
|..|||||||||||||||||||.|||||.|||||||||||.||.||.|||
RBAM_015680__ 200 GCCTGCTTGATTTTGATACATTTGATGAGCGGATTAAAACAGCGATTCAA 249
BSNT_02600___ 250 ATTGCAGAAGCTAAAGGAATTGATATAGAGTTTCGGGTAGAAGACGCAGT 299
|||||.||||..||.||.||..||.|||||||.||...|||.||.||.||
RBAM_015680__ 250 ATTGCGGAAGAGAAGGGCATATATGTAGAGTTCCGTACAGAGGATGCCGT 299
BSNT_02600___ 300 CCCGGTCCATCCGAACACAACAAAAATCACCATTTCTGATGAAAAGGGTG 349
.||.||.||||||||.|||.|....|||..||||||||||||..||||.|
RBAM_015680__ 300 GCCCGTTCATCCGAATACAGCGCGCATCGTCATTTCTGATGATGAGGGAG 349
BSNT_02600___ 350 AGCTGGAACTGACGGGTATTTCGATTGGCGGAGGAAAGATTGAAATCACA 399
||||.|..||.||.||||||||.||.|||||.|||||.||.||||||||.
RBAM_015680__ 350 AGCTTGCCCTTACCGGTATTTCCATCGGCGGCGGAAAAATAGAAATCACG 399
BSNT_02600___ 400 GAATTGAATGGTTTTGAGCTCCGGCTGTCAGGAAATCATCCGGCCATATT 449
||..|.||.||.||||||||.||..||||.|||||.||||||||.||.||
RBAM_015680__ 400 GAGCTCAACGGCTTTGAGCTGCGTTTGTCCGGAAACCATCCGGCTATTTT 449
BSNT_02600___ 450 AGTTGTTCATAATGACAAGTTTGGCACAATTGCCGGTGTTGCCAATGTTC 499
|||.|||||.|||||.||.||.|||||.|||||.||.|||||||||||.|
RBAM_015680__ 450 AGTCGTTCACAATGATAAATTCGGCACGATTGCAGGCGTTGCCAATGTGC 499
BSNT_02600___ 500 TGGCGAAATTTTCAATCAACGTAGGACATATGGAAGTAGCCCGGAAAGAT 549
|.||||||||.||.||||||||.||||||||||||||.||.||.||.||.
RBAM_015680__ 500 TTGCGAAATTCTCCATCAACGTCGGACATATGGAAGTGGCGCGTAAGGAC 549
BSNT_02600___ 550 ATCGGCCAGCTTGCGCTGATGACAATAGAGGTCGACCAAAATATTGACGA 599
.||||||||||||||||||||||.||.||||||||.||.||||||||.||
RBAM_015680__ 550 GTCGGCCAGCTTGCGCTGATGACGATTGAGGTCGATCAGAATATTGAAGA 599
BSNT_02600___ 600 CCACATTCTCGACGAGCTGTCGAAGCTGCCGAATATTATTCAAGTGACAA 649
..|..|.||.||||||||.||.|..||.||.||||||||.||.||.||.|
RBAM_015680__ 600 AGAAGTGCTTGACGAGCTTTCAACACTTCCTAATATTATACAGGTTACTA 649
BSNT_02600___ 650 AGATTGCTGACTAG 663
||||.||||||||.
RBAM_015680__ 650 AGATAGCTGACTAA 663
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