Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02598 and RBAM_015670

See DNA alignment / Visit BSNT_02598 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:26
# Commandline: needle
#    -asequence pep-align/BSNT_02598___yloV.1.9828.seq
#    -bsequence pep-align/RBAM_015670___yloV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02598___yloV-RBAM_015670___yloV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02598___yloV-RBAM_015670___yloV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02598___yloV
# 2: RBAM_015670___yloV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 556
# Identity:     444/556 (79.9%)
# Similarity:   504/556 (90.6%)
# Gaps:           4/556 ( 0.7%)
# Score: 2229.0
# 
#
#=======================================

BSNT_02598___      1 MSIRTLNGRTFAEMILAGAQNLSQNASAVDALNVFPVPDGDTGTNMNLSM     50
                     ||.|.|:||.||.||||||:.|||||||||||||||||||||||||||||
RBAM_015670__      1 MSRRNLDGRAFAAMILAGAETLSQNASAVDALNVFPVPDGDTGTNMNLSM     50

BSNT_02598___     51 TSGAREVEQMDTDDIGKVGSALSKGLLMGARGNSGVILSQLFRGFSKSIE    100
                     :|||||||.:|:.||||||.|||||||||||||||||||||||||:||||
RBAM_015670__     51 SSGAREVEHIDSPDIGKVGIALSKGLLMGARGNSGVILSQLFRGFTKSIE    100

BSNT_02598___    101 TKKEINALEFAAALQAGVDMAYKAVMKPVEGTILTVAKDAAKKAMILAEK    150
                     .|.:|:|.||||||||||||||||||||||||||||||||||||:..|::
RBAM_015670__    101 NKNQIDAQEFAAALQAGVDMAYKAVMKPVEGTILTVAKDAAKKAVASAKE    150

BSNT_02598___    151 ETDITALMIAVTEEAEASLNRTPELLPVLKEVGVVDSGGKGLLCVYEGFL    200
                     ||||.::|.||.|||||||||||:||||||:|||||||||||||||||||
RBAM_015670__    151 ETDIISVMEAVIEEAEASLNRTPDLLPVLKDVGVVDSGGKGLLCVYEGFL    200

BSNT_02598___    201 ASLKGETVPQKAVLPSLDDMVSAEHHKSAQSMMNTEDIEFGFCTEVMVRL    250
                     |:||||.||:|||||:|||||:||||||||||::||||||||||||||||
RBAM_015670__    201 AALKGEAVPKKAVLPALDDMVNAEHHKSAQSMLSTEDIEFGFCTEVMVRL    250

BSNT_02598___    251 DQTKREFDEGTFRQDLSQFGDSLLVIADESLAKVHIHAEEPGNVLNYAQH    300
                     ||.||.|.|.|||.:||:|||||||:||::||||||||||||||||.||.
RBAM_015670__    251 DQDKRTFKEETFRNELSRFGDSLLVVADDTLAKVHIHAEEPGNVLNLAQR    300

BSNT_02598___    301 YGELIKIKIENMREQHTSIISQ---ESKPADNEIPPAKQPYGIVTVAMGE    347
                     ||:|||||||||||||||||||   |.||| ..:..|::|:|||||||||
RBAM_015670__    301 YGDLIKIKIENMREQHTSIISQEHDEKKPA-GVMKEARKPFGIVTVAMGE    349

BSNT_02598___    348 GISDLFKSIGASVVIEGGQTMNPSTEDIVDAVKSVNADTVFILPNNSNII    397
                     |||:||.|||||.||||||||||||||||:|::||||:|||||||||||:
RBAM_015670__    350 GISELFTSIGASHVIEGGQTMNPSTEDIVEAIQSVNAETVFILPNNSNIV    399

BSNT_02598___    398 MAANQAASVVDEQVFVIPAKTVPQGMSALLAFNPDQEAEANEANMLSAIQ    447
                     |||||||||.:|.|.|||||||||||:|||||||||.|:.||||||.||:
RBAM_015670__    400 MAANQAASVAEENVIVIPAKTVPQGMTALLAFNPDQPADVNEANMLEAIR    449

BSNT_02598___    448 QVKSGQVTFSVRDTHIDGKDIKKGDFMGILNGTIIGTSENQLSAAKMLLS    497
                     .|||||||:|||||||||||||||||:||||.:|||::|:::||||:||.
RBAM_015670__    450 NVKSGQVTYSVRDTHIDGKDIKKGDFIGILNSSIIGSAEDRISAAKLLLD    499

BSNT_02598___    498 EMIGEDDEIVTILYGEDASQEEAEQLEAFLSEKYEEIEVEIHNGKQPLYS    547
                     ||||::||||||||||||.:||||:|..:::...|:||||||||:||||.
RBAM_015670__    500 EMIGDEDEIVTILYGEDAPEEEAEKLAEYIASVCEDIEVEIHNGRQPLYP    549

BSNT_02598___    548 YIVSAE    553
                     ||.:||
RBAM_015670__    550 YIFAAE    555


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