Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02597 and RBAM_015660

See DNA alignment / Visit BSNT_02597 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:26
# Commandline: needle
#    -asequence pep-align/BSNT_02597___yloU.1.9828.seq
#    -bsequence pep-align/RBAM_015660___yloU.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02597___yloU-RBAM_015660___yloU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02597___yloU-RBAM_015660___yloU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02597___yloU
# 2: RBAM_015660___yloU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:     111/120 (92.5%)
# Similarity:   118/120 (98.3%)
# Gaps:           0/120 ( 0.0%)
# Score: 570.0
# 
#
#=======================================

BSNT_02597___      1 MSIELRTKYGQIDISNEVIAMVAGGAAVDCYGIVGMASKNQIKDGLTEIL     50
                     ||||::|||||||||||||||||||||:||||||||||||||||||:|||
RBAM_015660__      1 MSIEMKTKYGQIDISNEVIAMVAGGAAIDCYGIVGMASKNQIKDGLSEIL     50

BSNT_02597___     51 RKENFSRGVQVRQEGEQIHIDMYIIVSYGTKISEVAHNVQTKVKYTVNQT    100
                     |:|||::||.||||.|||||||||||||||||||||||||||||||||||
RBAM_015660__     51 RRENFAKGVHVRQEAEQIHIDMYIIVSYGTKISEVAHNVQTKVKYTVNQT    100

BSNT_02597___    101 IGLAVDSVNIYVQGVRVTNP    120
                     ||||||||||||||||||||
RBAM_015660__    101 IGLAVDSVNIYVQGVRVTNP    120


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