Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02597 and RBAM_015660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:26
# Commandline: needle
# -asequence dna-align/BSNT_02597___yloU.1.9828.seq
# -bsequence dna-align/RBAM_015660___yloU.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02597___yloU-RBAM_015660___yloU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02597___yloU-RBAM_015660___yloU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02597___yloU
# 2: RBAM_015660___yloU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 365
# Identity: 310/365 (84.9%)
# Similarity: 310/365 (84.9%)
# Gaps: 4/365 ( 1.1%)
# Score: 1306.0
#
#
#=======================================
BSNT_02597___ 1 GTGTCCATTG-AATTAAGAACGAAGTACGGACAGATTGATATATCTAATG 49
|||||||||| |||.||| ||.||.||||||||||||||||||||.||.|
RBAM_015660__ 1 GTGTCCATTGAAATGAAG-ACAAAATACGGACAGATTGATATATCCAACG 49
BSNT_02597___ 50 AAGTCATCGCGATGGTTGCAGGAGGCGCGGCGGTTGACTGTTACGGCATT 99
||||||||||.||||||||.||||||||.||..|||||||||||||.||.
RBAM_015660__ 50 AAGTCATCGCAATGGTTGCCGGAGGCGCTGCCATTGACTGTTACGGAATA 99
BSNT_02597___ 100 GTCGGCATGGCCTCTAAAAACCAGATTAAAGACGGACTGACTGAAATCCT 149
||.||.||||||||.||||||||||||||||||||..||.||||||||||
RBAM_015660__ 100 GTGGGGATGGCCTCAAAAAACCAGATTAAAGACGGTTTGTCTGAAATCCT 149
BSNT_02597___ 150 TCGGAAAGAGAATTTCAGC-AGGGGTGTCCAAGTTCGCCAAGAAGGAGAA 198
.||||.||||||.||| || |..||.||.||.||.||.||.||||..|||
RBAM_015660__ 150 CCGGAGAGAGAACTTC-GCAAAAGGCGTACATGTCCGTCAGGAAGCCGAA 198
BSNT_02597___ 199 CAGATACATATCGACATGTATATCATTGTCAGCTACGGCACGAAAATTTC 248
||.|||||||||||||||||.||.|||||||||||||||||.|||||.||
RBAM_015660__ 199 CAAATACATATCGACATGTACATTATTGTCAGCTACGGCACTAAAATATC 248
BSNT_02597___ 249 TGAAGTGGCACATAATGTCCAAACAAAAGTAAAGTACACAGTAAATCAAA 298
.|||||.||.||.|||||.||.||.||.|||||.||||||||||||||||
RBAM_015660__ 249 CGAAGTAGCCCACAATGTTCAGACGAAGGTAAAATACACAGTAAATCAAA 298
BSNT_02597___ 299 CCATCGGACTGGCAGTGGACTCTGTCAATATTTATGTCCAAGGCGTACGA 348
|.||||||||.|||||.||.|||||.||||||||||||||||||||||||
RBAM_015660__ 299 CAATCGGACTTGCAGTTGATTCTGTAAATATTTATGTCCAAGGCGTACGA 348
BSNT_02597___ 349 GTGACGAACCCGTAG 363
||.||||||||||||
RBAM_015660__ 349 GTAACGAACCCGTAG 363
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