Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02589 and RBAM_015590

See DNA alignment / Visit BSNT_02589 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:26
# Commandline: needle
#    -asequence pep-align/BSNT_02589___prpC.1.9828.seq
#    -bsequence pep-align/RBAM_015590___prpC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02589___prpC-RBAM_015590___prpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02589___prpC-RBAM_015590___prpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02589___prpC
# 2: RBAM_015590___prpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:     177/257 (68.9%)
# Similarity:   221/257 (86.0%)
# Gaps:           4/257 ( 1.6%)
# Score: 970.0
# 
#
#=======================================

BSNT_02589___      1 ---MLTALKTDTGKIRQHNEDDAGIFKGKDEFILAVVADGMGGHLAGDVA     47
                        ::|||||||||:|:||||.||||. |::.:|||||||||||||||||
RBAM_015590__      1 MKRLITALKTDTGKVRRHNEDAAGIFT-KEDAVLAVVADGMGGHLAGDVA     49

BSNT_02589___     48 SKMAVKAMGEKWNEAETIPTAPSECEKWLIEQILSVNSKIYDHAQAHEEC     97
                     |:|||.||.|:||..||:|:.||.||.||.::|...|.|::|||:|:|||
RBAM_015590__     50 SRMAVAAMEEQWNRTETVPSLPSACEDWLKDRIHEANVKVHDHAKANEEC     99

BSNT_02589___     98 QGMGTTIVCALFTGKTVSVAHIGDSRCYLLQDDDFVQVTEDHSLVNELVR    147
                     :|||||:||||||||.|:|||||||||||||:.:|.|:|||||||||||:
RBAM_015590__    100 RGMGTTVVCALFTGKFVTVAHIGDSRCYLLQEGEFTQLTEDHSLVNELVK    149

BSNT_02589___    148 TGEISREDAEHHPRKNVLTKALGTDQSVSIDTRSFDIEPGDKLLLCSDGL    197
                     |||||:|||||||||||||:|||||:::|.|.|||::..||:||||||||
RBAM_015590__    150 TGEISKEDAEHHPRKNVLTRALGTDETISPDARSFELSDGDQLLLCSDGL    199

BSNT_02589___    198 TNKVEGTELKDILQSDSAPQEKVNLLVDKANQNGGEDNITAVLLELALQV    247
                     :||:|..|:|.:||::..|||||:||:.|||||||||||||||:|.:...
RBAM_015590__    200 SNKIEDHEIKQMLQAEFDPQEKVDLLISKANQNGGEDNITAVLIEFSADA    249

BSNT_02589___    248 EEGEDQC    254
                     :||||:|
RBAM_015590__    250 KEGEDKC    256


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