Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02587 and RBAM_015570

See DNA alignment / Visit BSNT_02587 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:25
# Commandline: needle
#    -asequence pep-align/BSNT_02587___yloM.1.9828.seq
#    -bsequence pep-align/RBAM_015570___rsmB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02587___yloM-RBAM_015570___rsmB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02587___yloM-RBAM_015570___rsmB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02587___yloM
# 2: RBAM_015570___rsmB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity:     379/447 (84.8%)
# Similarity:   410/447 (91.7%)
# Gaps:           0/447 ( 0.0%)
# Score: 1961.0
# 
#
#=======================================

BSNT_02587___      1 MKKTSVRDIALEALIKLEQNQAYSNLLLKSVIKSNELSDQDRGLLTELVY     50
                     |||.:||::|||||.|||||||||||||.||||:|.||||||||||||||
RBAM_015570__      1 MKKINVRELALEALEKLEQNQAYSNLLLTSVIKTNTLSDQDRGLLTELVY     50

BSNT_02587___     51 GTLQNKIALDYMLKPFINKPQKVKPWVIQLLRLSLYQMEYLEKIPDRAAI    100
                     |||||||||||||||||.||.|||.|||||||||.|||||||||||||||
RBAM_015570__     51 GTLQNKIALDYMLKPFIRKPNKVKSWVIQLLRLSAYQMEYLEKIPDRAAI    100

BSNT_02587___    101 HEAVEIAKIRGHKGIASFVNGVLRSIQREGVPSFDAIEDPVRRLATETSH    150
                     ||||||||.||||||||||||:|||:||||||||..|||||.||:|||||
RBAM_015570__    101 HEAVEIAKKRGHKGIASFVNGILRSLQREGVPSFAEIEDPVLRLSTETSH    150

BSNT_02587___    151 PEWLVKEWADAYGFEAAEKICRIHLIPPKQTLRVNQMKADRAELLDQMAA    200
                     ||||||||.:|||||||||||||||||||||||||.:|:||..:|::|..
RBAM_015570__    151 PEWLVKEWVEAYGFEAAEKICRIHLIPPKQTLRVNHIKSDRETVLNEMEN    200

BSNT_02587___    201 EGIEVEKGDLAEDAVKLLKGTIAGTHFFQNGEVSIQDESSMLVARALDPK    250
                     .|:|.|.|||:.||:|||||:||.|.|||||.||||||||||||||||||
RBAM_015570__    201 AGLEAEAGDLSPDAIKLLKGSIANTAFFQNGRVSIQDESSMLVARALDPK    250

BSNT_02587___    251 PDETVLDACAAPGGKSAHIAELMQNKGSVTSLDLHKHKVKLIKEAADRLG    300
                     |.|||||||||||||||||||||:|:||:||||||:||||||||.|:|||
RBAM_015570__    251 PGETVLDACAAPGGKSAHIAELMENEGSLTSLDLHRHKVKLIKEGAERLG    300

BSNT_02587___    301 LTIIHAETMDARKAGETFENEQFDRILVDAPCSGFGVIRRKPDMKYTKKP    350
                     ||||.|:|||||||||.|..|:|||:||||||||||||||||||||||.|
RBAM_015570__    301 LTIIDAQTMDARKAGEAFGAERFDRVLVDAPCSGFGVIRRKPDMKYTKTP    350

BSNT_02587___    351 DDSARLAEIQLSILREIAPLVKKGGTLVYSTCTMDRTENDEVIHAFIQEH    400
                     :||.||:||||.|||||||||||||||||||||||||||:||:|||||||
RBAM_015570__    351 EDSRRLSEIQLGILREIAPLVKKGGTLVYSTCTMDRTENEEVMHAFIQEH    400

BSNT_02587___    401 PDFEPDLSLEKRLPEKVRPFVRDGRLQILPHYFGTDGFFICSMRKKG    447
                     |:||||||||||||||.||||:||.|||||||||||||||.||||||
RBAM_015570__    401 PEFEPDLSLEKRLPEKARPFVQDGSLQILPHYFGTDGFFISSMRKKG    447


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