Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02587 and RBAM_015570
See
DNA alignment /
Visit
BSNT_02587 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:25
# Commandline: needle
# -asequence pep-align/BSNT_02587___yloM.1.9828.seq
# -bsequence pep-align/RBAM_015570___rsmB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02587___yloM-RBAM_015570___rsmB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02587___yloM-RBAM_015570___rsmB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02587___yloM
# 2: RBAM_015570___rsmB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity: 379/447 (84.8%)
# Similarity: 410/447 (91.7%)
# Gaps: 0/447 ( 0.0%)
# Score: 1961.0
#
#
#=======================================
BSNT_02587___ 1 MKKTSVRDIALEALIKLEQNQAYSNLLLKSVIKSNELSDQDRGLLTELVY 50
|||.:||::|||||.|||||||||||||.||||:|.||||||||||||||
RBAM_015570__ 1 MKKINVRELALEALEKLEQNQAYSNLLLTSVIKTNTLSDQDRGLLTELVY 50
BSNT_02587___ 51 GTLQNKIALDYMLKPFINKPQKVKPWVIQLLRLSLYQMEYLEKIPDRAAI 100
|||||||||||||||||.||.|||.|||||||||.|||||||||||||||
RBAM_015570__ 51 GTLQNKIALDYMLKPFIRKPNKVKSWVIQLLRLSAYQMEYLEKIPDRAAI 100
BSNT_02587___ 101 HEAVEIAKIRGHKGIASFVNGVLRSIQREGVPSFDAIEDPVRRLATETSH 150
||||||||.||||||||||||:|||:||||||||..|||||.||:|||||
RBAM_015570__ 101 HEAVEIAKKRGHKGIASFVNGILRSLQREGVPSFAEIEDPVLRLSTETSH 150
BSNT_02587___ 151 PEWLVKEWADAYGFEAAEKICRIHLIPPKQTLRVNQMKADRAELLDQMAA 200
||||||||.:|||||||||||||||||||||||||.:|:||..:|::|..
RBAM_015570__ 151 PEWLVKEWVEAYGFEAAEKICRIHLIPPKQTLRVNHIKSDRETVLNEMEN 200
BSNT_02587___ 201 EGIEVEKGDLAEDAVKLLKGTIAGTHFFQNGEVSIQDESSMLVARALDPK 250
.|:|.|.|||:.||:|||||:||.|.|||||.||||||||||||||||||
RBAM_015570__ 201 AGLEAEAGDLSPDAIKLLKGSIANTAFFQNGRVSIQDESSMLVARALDPK 250
BSNT_02587___ 251 PDETVLDACAAPGGKSAHIAELMQNKGSVTSLDLHKHKVKLIKEAADRLG 300
|.|||||||||||||||||||||:|:||:||||||:||||||||.|:|||
RBAM_015570__ 251 PGETVLDACAAPGGKSAHIAELMENEGSLTSLDLHRHKVKLIKEGAERLG 300
BSNT_02587___ 301 LTIIHAETMDARKAGETFENEQFDRILVDAPCSGFGVIRRKPDMKYTKKP 350
||||.|:|||||||||.|..|:|||:||||||||||||||||||||||.|
RBAM_015570__ 301 LTIIDAQTMDARKAGEAFGAERFDRVLVDAPCSGFGVIRRKPDMKYTKTP 350
BSNT_02587___ 351 DDSARLAEIQLSILREIAPLVKKGGTLVYSTCTMDRTENDEVIHAFIQEH 400
:||.||:||||.|||||||||||||||||||||||||||:||:|||||||
RBAM_015570__ 351 EDSRRLSEIQLGILREIAPLVKKGGTLVYSTCTMDRTENEEVMHAFIQEH 400
BSNT_02587___ 401 PDFEPDLSLEKRLPEKVRPFVRDGRLQILPHYFGTDGFFICSMRKKG 447
|:||||||||||||||.||||:||.|||||||||||||||.||||||
RBAM_015570__ 401 PEFEPDLSLEKRLPEKARPFVQDGSLQILPHYFGTDGFFISSMRKKG 447
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.