Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02584 and RBAM_015540

See DNA alignment / Visit BSNT_02584 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:25
# Commandline: needle
#    -asequence pep-align/BSNT_02584___priA.1.9828.seq
#    -bsequence pep-align/RBAM_015540___priA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02584___priA-RBAM_015540___priA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02584___priA-RBAM_015540___priA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02584___priA
# 2: RBAM_015540___priA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 805
# Identity:     679/805 (84.3%)
# Similarity:   737/805 (91.6%)
# Gaps:           2/805 ( 0.2%)
# Score: 3536.5
# 
#
#=======================================

BSNT_02584___      1 MNFAEVIVDVSTKNIDRPFDYKIPDHLKGMIKTGMRVIVPFGPRKIQGFV     50
                     ||.||||||||:|||||||||||||||||||:.||||||||||||:||||
RBAM_015540__      1 MNVAEVIVDVSSKNIDRPFDYKIPDHLKGMIEVGMRVIVPFGPRKLQGFV     50

BSNT_02584___     51 TAVKEASDLSGKSVKEVEGLLDLTPVLTEELMDLSSWLSDKTLSFKITAL    100
                     |.:||:|:|:|.|:||||.|||||||||||||.|||||||||||||||||
RBAM_015540__     51 TGLKESSELNGGSMKEVEKLLDLTPVLTEELMQLSSWLSDKTLSFKITAL    100

BSNT_02584___    101 QAMLPAALKAKYEKELKIAHGADLPPQVERLFTETKTLLYSDIPDHDTLK    150
                     |||||||||||||||||:.....|.|.:::||...|:||||||.|...|.
RBAM_015540__    101 QAMLPAALKAKYEKELKVVDEEALTPDIKQLFRNQKSLLYSDITDESILS    150

BSNT_02584___    151 LIQRHVQKGDIDVTYKVAQKTNKKMVRHIQANASKEELAKQAEGLSRQAA    200
                     .:|:.|:||.|||||||||||||||:|.|:|.|.|||||:.|:.|::||:
RBAM_015540__    151 SLQKFVRKGSIDVTYKVAQKTNKKMIRMIEAGADKEELARHADALTKQAS    200

BSNT_02584___    201 KQQAILHFLISEPEGVKIPAAELCKKTDTSSATIKTLIQKGLLKESYEEV    250
                     ||..:|.:.|.  .|.||.|||||||||:||||:|||::||||.||:|||
RBAM_015540__    201 KQLTVLTYFIG--GGAKISAAELCKKTDSSSATLKTLLKKGLLTESFEEV    248

BSNT_02584___    251 YRDPYQDKMFKKTEPLPLTDEQRAAFEPIRETLDSDEHKVFLLHGVTGSG    300
                     |||||||:||||||||.||:||:||||||::.:....|.|||||||||||
RBAM_015540__    249 YRDPYQDRMFKKTEPLSLTEEQQAAFEPIKQAVADHVHHVFLLHGVTGSG    298

BSNT_02584___    301 KTEIYLQSIEKVLAKGKEAIVLVPEISLTPQMVNRFKGRFGSQVAVMHSG    350
                     ||||||||||||||||:|||||||||||||||||||||||||||||||||
RBAM_015540__    299 KTEIYLQSIEKVLAKGQEAIVLVPEISLTPQMVNRFKGRFGSQVAVMHSG    348

BSNT_02584___    351 LSTGEKYDEWRKIHRKEVRLVVGARSAIFAPFENLGMIIIDEEHESSYKQ    400
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
RBAM_015540__    349 LSTGEKYDEWRKIQRKEVRLVVGARSAIFAPFENLGMIIIDEEHESSYKQ    398

BSNT_02584___    401 EEMPRYHAKEVAIKRAEHHSCPVVLGSATPTLESYARAQKGVYELLSLKH    450
                     |||||||||:|||:||||||||||||||||||||:|||:|||||||.|||
RBAM_015540__    399 EEMPRYHAKDVAIRRAEHHSCPVVLGSATPTLESFARAKKGVYELLPLKH    448

BSNT_02584___    451 RVNHRVMPEVSLVDMREELRNGNRSMFSVELMEKLEETIAKGEQAVLFLN    500
                     |||.::||:|||||||||||||||||||.||||:|||.:||.||||||||
RBAM_015540__    449 RVNRQLMPDVSLVDMREELRNGNRSMFSRELMEQLEEKLAKKEQAVLFLN    498

BSNT_02584___    501 KRGYSSFVMCRDCGYVPQCPHCDISMTYHRYGQRLKCHYCGHEEPVPHTC    550
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_015540__    499 KRGYSSFVMCRDCGYVPQCPHCDISMTYHRYGQRLKCHYCGHEEPVPGTC    548

BSNT_02584___    551 PECASEHIRFFGTGTQRVEEELTKVLPSARVIRMDVDTTSRKGAHEKLLS    600
                     |||.|||||||||||||||||||||||.||||||||||||||||||||||
RBAM_015540__    549 PECGSEHIRFFGTGTQRVEEELTKVLPQARVIRMDVDTTSRKGAHEKLLS    598

BSNT_02584___    601 AFGEGKADILLGTQMIAKGLDFPNVTLVGVLSADTTLHIPDFRSAEKTFQ    650
                     |||||||||||||||||||||||||||||||||||||||||||:||||||
RBAM_015540__    599 AFGEGKADILLGTQMIAKGLDFPNVTLVGVLSADTTLHIPDFRAAEKTFQ    648

BSNT_02584___    651 LLTQVSGRAGRHEKPGHVIIQTYTPSHYSIQLTKTHDYETFYQHEMAHRR    700
                     ||||||||||||||||.|:||||||||||||||||||||||:|.||||||
RBAM_015540__    649 LLTQVSGRAGRHEKPGTVVIQTYTPSHYSIQLTKTHDYETFFQQEMAHRR    698

BSNT_02584___    701 EQSYPPYYYLALVTVSHEEVAKAAVTAEKIAHFLKANCGADTKILGPSAS    750
                     .||||||||:|||||||||.||||||||||.::|:|.||.|||||||:||
RBAM_015540__    699 AQSYPPYYYVALVTVSHEEAAKAAVTAEKITNYLRAGCGPDTKILGPAAS    748

BSNT_02584___    751 PIARIKDRYRYQCVIKYKQETQLSALLKKILEHYKREIEQKHVMISIDMN    800
                     |||||||||||||||||:||.:|...||||||||||:|.|||||||||||
RBAM_015540__    749 PIARIKDRYRYQCVIKYRQENELQIQLKKILEHYKRDIAQKHVMISIDMN    798

BSNT_02584___    801 PYMMM    805
                     |||:|
RBAM_015540__    799 PYMLM    803


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02584 and RBAM_015540

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
