Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02581 and RBAM_015520

See DNA alignment / Visit BSNT_02581 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:25
# Commandline: needle
#    -asequence pep-align/BSNT_02581___rpoZ.1.9828.seq
#    -bsequence pep-align/RBAM_015520___rpoZ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02581___rpoZ-RBAM_015520___rpoZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02581___rpoZ-RBAM_015520___rpoZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02581___rpoZ
# 2: RBAM_015520___rpoZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 67
# Identity:      64/67 (95.5%)
# Similarity:    65/67 (97.0%)
# Gaps:           0/67 ( 0.0%)
# Score: 318.0
# 
#
#=======================================

BSNT_02581___      1 MLDPSIDSLMNKLDSKYTLVTVSARRAREMQIKKDQMIEHTISHKYVGKA     50
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_015520__      1 MLDPSIDSLMNKLDSKYTLVTVSARRAREMQIKKDQQIEHTISHKYVGKA     50

BSNT_02581___     51 LEEIDAGLLSFEKEDRE     67
                     ||||||||||||:||.|
RBAM_015520__     51 LEEIDAGLLSFEREDSE     67


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.