Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02581 and RBAM_015520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:25
# Commandline: needle
# -asequence dna-align/BSNT_02581___rpoZ.1.9828.seq
# -bsequence dna-align/RBAM_015520___rpoZ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02581___rpoZ-RBAM_015520___rpoZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02581___rpoZ-RBAM_015520___rpoZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02581___rpoZ
# 2: RBAM_015520___rpoZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 185/204 (90.7%)
# Similarity: 185/204 (90.7%)
# Gaps: 0/204 ( 0.0%)
# Score: 849.0
#
#
#=======================================
BSNT_02581___ 1 ATGTTAGATCCGTCAATTGATTCTTTAATGAATAAATTAGATTCAAAATA 50
||||||||||||||||||||.|||||||||||||||||||||||.|||||
RBAM_015520__ 1 ATGTTAGATCCGTCAATTGACTCTTTAATGAATAAATTAGATTCTAAATA 50
BSNT_02581___ 51 TACGCTCGTGACTGTTTCTGCGAGACGCGCCCGTGAAATGCAAATCAAAA 100
||||||.|||||.||.|||||.||||||||.|||||||||||.|||||||
RBAM_015520__ 51 TACGCTGGTGACCGTGTCTGCAAGACGCGCGCGTGAAATGCAGATCAAAA 100
BSNT_02581___ 101 AAGACCAAATGATTGAACATACGATTTCACACAAATATGTAGGCAAAGCT 150
|||||||...||||||||||||.|||||.|||||||||||||||||||||
RBAM_015520__ 101 AAGACCAGCAGATTGAACATACCATTTCTCACAAATATGTAGGCAAAGCT 150
BSNT_02581___ 151 TTAGAAGAAATTGATGCAGGCCTGCTTTCGTTTGAAAAGGAAGACCGCGA 200
||||||||||||||.||.|||||||||||||||||||..||||||.||||
RBAM_015520__ 151 TTAGAAGAAATTGACGCGGGCCTGCTTTCGTTTGAAAGAGAAGACAGCGA 200
BSNT_02581___ 201 ATAG 204
|||.
RBAM_015520__ 201 ATAA 204
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