Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02580 and RBAM_015510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:24
# Commandline: needle
# -asequence pep-align/BSNT_02580___gmk.1.9828.seq
# -bsequence pep-align/RBAM_015510___gmk.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02580___gmk-RBAM_015510___gmk.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02580___gmk-RBAM_015510___gmk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02580___gmk
# 2: RBAM_015510___gmk
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 190/204 (93.1%)
# Similarity: 200/204 (98.0%)
# Gaps: 0/204 ( 0.0%)
# Score: 980.0
#
#
#=======================================
BSNT_02580___ 1 MKERGLLIVLSGPSGVGKGTVRQAIFSQEDTKFEYSISVTTRSPREGEVN 50
||||||||||||||||||||||||||||:|||||||||||||:||||||:
RBAM_015510__ 1 MKERGLLIVLSGPSGVGKGTVRQAIFSQQDTKFEYSISVTTRNPREGEVD 50
BSNT_02580___ 51 GVDYFFKTRDEFEQMIADNKLLEWAEYVGNYYGTPVDYVEQTLQDGKDVF 100
|||||||:|||||:||.:||||||||||||||||||||||||||:|||||
RBAM_015510__ 51 GVDYFFKSRDEFERMIENNKLLEWAEYVGNYYGTPVDYVEQTLQEGKDVF 100
BSNT_02580___ 101 LEIEVQGALQVRNAFPEGLFIFLAPPSLSELKNRIVTRGTETDALIENRM 150
|||||||||||||||||||||||||||||||||||||||||||.||||||
RBAM_015510__ 101 LEIEVQGALQVRNAFPEGLFIFLAPPSLSELKNRIVTRGTETDDLIENRM 150
BSNT_02580___ 151 KAAKAEIEMMDAYDYVVENDNVETACDKIKAIVLAEHLKRERVAPRYKKM 200
.|||||||||||||||||||:::||||||.||||||||||||||||||||
RBAM_015510__ 151 NAAKAEIEMMDAYDYVVENDDIQTACDKINAIVLAEHLKRERVAPRYKKM 200
BSNT_02580___ 201 LEVE 204
||||
RBAM_015510__ 201 LEVE 204
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