Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02580 and RBAM_015510
See
Amino acid alignment /
Visit
BSNT_02580 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:25
# Commandline: needle
# -asequence dna-align/BSNT_02580___gmk.1.9828.seq
# -bsequence dna-align/RBAM_015510___gmk.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02580___gmk-RBAM_015510___gmk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02580___gmk-RBAM_015510___gmk.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02580___gmk
# 2: RBAM_015510___gmk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 615
# Identity: 520/615 (84.6%)
# Similarity: 520/615 (84.6%)
# Gaps: 0/615 ( 0.0%)
# Score: 2220.0
#
#
#=======================================
BSNT_02580___ 1 ATGAAAGAAAGAGGTTTATTAATCGTTCTCTCAGGTCCCTCAGGAGTTGG 50
||||||||||||||.||||||||||||||||||||||||||.||||||||
RBAM_015510__ 1 ATGAAAGAAAGAGGGTTATTAATCGTTCTCTCAGGTCCCTCCGGAGTTGG 50
BSNT_02580___ 51 TAAAGGAACGGTTCGACAAGCGATCTTTTCGCAGGAAGACACAAAATTTG 100
.||||||||||||||.|||||.||.|||||.||..|.|||||.|||||||
RBAM_015510__ 51 AAAAGGAACGGTTCGGCAAGCAATATTTTCACAACAGGACACGAAATTTG 100
BSNT_02580___ 101 AATATTCGATTTCAGTAACCACAAGAAGTCCAAGAGAGGGCGAAGTGAAC 150
||||.||.||||||||.||.||.||||..||.|||||||||||.||..|.
RBAM_015510__ 101 AATACTCAATTTCAGTCACGACGAGAAACCCGAGAGAGGGCGAGGTCGAT 150
BSNT_02580___ 151 GGAGTCGATTATTTTTTCAAAACAAGAGATGAATTCGAGCAAATGATTGC 200
||.|||||||||||.||.|||.|.||||||||||||||.|..|||||||.
RBAM_015510__ 151 GGCGTCGATTATTTCTTTAAATCTAGAGATGAATTCGAACGCATGATTGA 200
BSNT_02580___ 201 GGACAACAAGCTGCTTGAATGGGCAGAGTATGTCGGCAATTATTACGGCA 250
..|||||||.||||||||.||||||||.|||||||||||.||||||||.|
RBAM_015510__ 201 AAACAACAAACTGCTTGAGTGGGCAGAATATGTCGGCAACTATTACGGAA 250
BSNT_02580___ 251 CGCCAGTCGATTATGTTGAACAGACGCTTCAAGATGGAAAAGACGTCTTT 300
||||.||.||||||||.|||||||||||||||||.||||||||||||||.
RBAM_015510__ 251 CGCCCGTTGATTATGTCGAACAGACGCTTCAAGAAGGAAAAGACGTCTTC 300
BSNT_02580___ 301 TTAGAAATTGAAGTTCAAGGGGCTCTTCAAGTGAGAAATGCTTTCCCGGA 350
|||||.||||||||.||.||.||.||.||||||.|.|||||.||.|||||
RBAM_015510__ 301 TTAGAGATTGAAGTGCAGGGCGCGCTCCAAGTGCGGAATGCATTTCCGGA 350
BSNT_02580___ 351 AGGCCTGTTTATTTTCCTTGCGCCTCCAAGCCTTTCTGAACTGAAAAACA 400
||||||||||||.|||.|.|||||.||.||.||||||||.||||||||||
RBAM_015510__ 351 AGGCCTGTTTATCTTCTTAGCGCCGCCGAGTCTTTCTGAGCTGAAAAACA 400
BSNT_02580___ 401 GAATCGTGACACGAGGCACAGAAACAGACGCTCTGATTGAAAATCGAATG 450
|||||||||||.||||.||.|||||.||||.|.|.||.|||||..|||||
RBAM_015510__ 401 GAATCGTGACAAGAGGAACTGAAACCGACGATTTAATCGAAAACAGAATG 450
BSNT_02580___ 451 AAAGCTGCAAAAGCTGAGATCGAAATGATGGATGCTTATGACTATGTCGT 500
||.||.|||||||||||.||||||||||||||.||.|||||.||||||||
RBAM_015510__ 451 AATGCCGCAAAAGCTGAAATCGAAATGATGGACGCGTATGATTATGTCGT 500
BSNT_02580___ 501 TGAAAACGATAATGTCGAAACGGCTTGCGATAAAATCAAAGCAATCGTTC 550
|||||||||..||.||.||||||||||.|||||.||.||.||||||||||
RBAM_015510__ 501 TGAAAACGACGATATCCAAACGGCTTGTGATAAGATTAACGCAATCGTTC 550
BSNT_02580___ 551 TTGCTGAACATTTGAAGCGTGAACGCGTTGCACCAAGATATAAGAAAATG 600
|.||.||.||.||.||.|||||||||||.||.||.|||||||||||||||
RBAM_015510__ 551 TCGCCGAGCACTTAAAACGTGAACGCGTCGCTCCGAGATATAAGAAAATG 600
BSNT_02580___ 601 CTGGAGGTTGAATAA 615
||||||||.||||||
RBAM_015510__ 601 CTGGAGGTAGAATAA 615
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.