Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02576 and RBAM_015480

See DNA alignment / Visit BSNT_02576 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:24
# Commandline: needle
#    -asequence pep-align/BSNT_02576___yloB.1.9828.seq
#    -bsequence pep-align/RBAM_015480___yloB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02576___yloB-RBAM_015480___yloB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02576___yloB-RBAM_015480___yloB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02576___yloB
# 2: RBAM_015480___yloB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 890
# Identity:     760/890 (85.4%)
# Similarity:   842/890 (94.6%)
# Gaps:           0/890 ( 0.0%)
# Score: 3931.0
# 
#
#=======================================

BSNT_02576___      1 MKFHEMGQTDLLEATNTSMKQGLTEKEVKKRLDKHGPNELQEGKKTSALL     50
                     ||||||||||||:|||||:|||||||||||||:|||||||||||:|.|:.
RBAM_015480__      1 MKFHEMGQTDLLKATNTSIKQGLTEKEVKKRLEKHGPNELQEGKRTPAIA     50

BSNT_02576___     51 LFFAQFKDFMVLVLLAATLISGFLGEYVDAVAIIAIVFVNGILGFFQERR    100
                     :||||||||||||||||||||||||||||||||:|||||||:||||||||
RBAM_015480__     51 VFFAQFKDFMVLVLLAATLISGFLGEYVDAVAIMAIVFVNGVLGFFQERR    100

BSNT_02576___    101 AEQSLQALKELSTPHVMALREGSWTKIPSKELVPGDIVKFTSGDRIGADV    150
                     ||:||.||||||||:|.|||:|||.||.|||||||||:||:|||||||||
RBAM_015480__    101 AEKSLHALKELSTPYVSALRDGSWKKIQSKELVPGDIMKFSSGDRIGADV    150

BSNT_02576___    151 RIVEARSLEIEESALTGESIPVVKHADKLKKPDVSLGDITNMAFMGTIVT    200
                     |||||:||||||||||||||||||.||||:|||||||||:||||||||||
RBAM_015480__    151 RIVEAKSLEIEESALTGESIPVVKQADKLRKPDVSLGDISNMAFMGTIVT    200

BSNT_02576___    201 RGSGVGVVVGTGMNTAMGKIADMLESAGTLSTPLQRRLEQLGKILIVVAL    250
                     ||||||||||||||||||||||||||||:||||||||||:||||||:|||
RBAM_015480__    201 RGSGVGVVVGTGMNTAMGKIADMLESAGSLSTPLQRRLEELGKILIIVAL    250

BSNT_02576___    251 LLTVLVVAVGVIQGHDLYSMFLAGVSLAVAAIPEGLPAIVTVALSLGVQR    300
                     |||||||||||:|||:|||||||||||||||||||||||||||||:||||
RBAM_015480__    251 LLTVLVVAVGVLQGHELYSMFLAGVSLAVAAIPEGLPAIVTVALSIGVQR    300

BSNT_02576___    301 MIKQKSIVRKLPAVETLGCASIICSDKTGTMTQNKMTVTHVWSGGKTWRV    350
                     |||||||||||||||||||||:||||||||:|||||||||:||||||::|
RBAM_015480__    301 MIKQKSIVRKLPAVETLGCASVICSDKTGTLTQNKMTVTHMWSGGKTFKV    350

BSNT_02576___    351 AGAGYEPKGSFTLNEKEINVNEHKPLQQMLLFGALCNNSNIEKRDGEYVL    400
                     :|.||||:|.||.:|:||...:.|.|:|||:||||||.|.|..:||.|||
RBAM_015480__    351 SGIGYEPEGVFTRDEREIKPKDEKILEQMLVFGALCNTSEIALKDGHYVL    400

BSNT_02576___    401 DGDPTEGALLTAARKGGFSKEFVESNYRVIEEFPFDSARKMMTVIVEDQD    450
                     |||||||||||||||||:|.:::..:|||:.||||||.||||||||||::
RBAM_015480__    401 DGDPTEGALLTAARKGGYSNDWLSGHYRVVAEFPFDSVRKMMTVIVEDRE    450

BSNT_02576___    451 RKRYIITKGAPDVLMQRSSRIYYDGSAALFSNERKAETEAVLRHLASQAL    500
                     :|:::|||||||||:.|||.:.||..:|.||.|:||||||||:.||||||
RBAM_015480__    451 KKQFVITKGAPDVLIDRSSHLMYDARSAPFSGEKKAETEAVLKELASQAL    500

BSNT_02576___    501 RTIAVAYRPIKAGETPSMEQAEKDLTMLGLSGIIDPPRPEVRQAIKECRE    550
                     ||||:||:.:|.||.|:||||||:||:|||||:|||||||||||||||||
RBAM_015480__    501 RTIAIAYKQLKPGEKPTMEQAEKNLTILGLSGMIDPPRPEVRQAIKECRE    550

BSNT_02576___    551 AGIKTVMITGDHVETAKAIAKDLRLLPKSGKIMDGKMLNELSQEELSHVV    600
                     ||||||||||||||||||||||||||||.|::||||.||||:::||...|
RBAM_015480__    551 AGIKTVMITGDHVETAKAIAKDLRLLPKKGRVMDGKTLNELTEKELIETV    600

BSNT_02576___    601 EDVYVFARVSPEHKLKIVKAYQENGHIVAMTGDGVNDAPAIKQADIGVSM    650
                     :|||||||||||||||||||:|||||:|||||||||||||||||||||:|
RBAM_015480__    601 DDVYVFARVSPEHKLKIVKAFQENGHVVAMTGDGVNDAPAIKQADIGVAM    650

BSNT_02576___    651 GITGTDVAKEASSLVLADDNFATIKSAIKEGRNIYENIRKFIRYLLASNV    700
                     |:||||||||||||:|.||||||||||||||||||||||||:||||||||
RBAM_015480__    651 GVTGTDVAKEASSLILVDDNFATIKSAIKEGRNIYENIRKFVRYLLASNV    700

BSNT_02576___    701 GEILVMLFAMLLALPLPLVPIQILWVNLVTDGLPAMALGMDQPEGDVMKR    750
                     ||||||||||||||||||||||||||||||||||||||||||||||:|:|
RBAM_015480__    701 GEILVMLFAMLLALPLPLVPIQILWVNLVTDGLPAMALGMDQPEGDLMRR    750

BSNT_02576___    751 KPRHPKEGVFARKLGWKVVSRGFLIGVATILAFIIVYHRNPENLAYAQTI    800
                     ||||||||||||||||||||||||||.|||||||||||||||||.||||:
RBAM_015480__    751 KPRHPKEGVFARKLGWKVVSRGFLIGAATILAFIIVYHRNPENLPYAQTV    800

BSNT_02576___    801 AFATLVLAQLIHVFDCRSETSVFSRNPFQNLYLIGAVLSSILLMLVVIYY    850
                     ||||||||||||||||||||||||||||:|:||:||::|||.||::||||
RBAM_015480__    801 AFATLVLAQLIHVFDCRSETSVFSRNPFENIYLLGAIISSIFLMVIVIYY    850

BSNT_02576___    851 PPLQPIFHTVAITPGDWMLVIGMSAIPTFLLAGSLLTRKK    890
                     |||||||.||.||||||||:||||.|||||||||||||||
RBAM_015480__    851 PPLQPIFKTVPITPGDWMLIIGMSGIPTFLLAGSLLTRKK    890


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02576 and RBAM_015480

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
